Parental gene:

NDUFC1, ENSETEG00000004800

Aliases:None
Description:NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa [Source:HGNC Symbol;Acc:7705]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_2054:5725..11336(-)


>ENSETEG00000004800
ATGGCGCCGCCCGCGGTCCTGCGCCCTTTCTCCCGGCTGCTGACCCCGGCCCGGCTCCCGAGTAGTCCTTCAGCGAGGTC
AATGTTTTACCTGCAAGAGCCAACAAATAGCAACCCTCATGGGCTGGGAGTGGGGCTGACCTTGGGCATCACGGTCTTCC
CGGGGCTCATCAAGCAACATAATGAAGATGTTTTAGAGTATAAAAGAAGAAATGGGTTGGAATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011040 ortholog_one2one 2 retrogenes
retro_amel_282, retro_amel_805,
Bos taurus ENSBTAG00000039582 ortholog_one2one 2 retrogenes
retro_btau_1578, retro_btau_496,
Dasypus novemcinctus ENSDNOG00000015639 ortholog_one2many 1 retrogene
retro_dnov_28,
Felis catus ENSFCAG00000008548 ortholog_one2one 1 retrogene
retro_fcat_146,
Loxodonta africana ENSLAFG00000010459 ortholog_one2many 5 retrogenes
retro_lafr_1034, retro_lafr_191, retro_lafr_77, retro_lafr_834, retro_lafr_869,
Microcebus murinus ENSMICG00000006836 ortholog_one2one 1 retrogene
retro_mmur_771,
Myotis lucifugus ENSMLUG00000009082 ortholog_one2one 2 retrogenes
retro_mluc_1603, retro_mluc_1660,
Ictidomys tridecemlineatus ENSSTOG00000023590 ortholog_one2one 3 retrogenes
retro_itri_1087, retro_itri_1109, retro_itri_1202,
Tursiops truncatus ENSTTRG00000001107 ortholog_one2one 2 retrogenes
retro_ttru_142, retro_ttru_586,
Vicugna pacos ENSVPAG00000007703 ortholog_one2one 1 retrogene
retro_vpac_161,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_87 74.03 100.00
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2. retro_etel_135 66.23 100.00
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3. retro_etel_195 53.42 95.95
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4. retro_etel_214 81.58 100.00
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5. retro_etel_670 75.32 100.00
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6. retro_etel_700 65.79 98.65
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7. retro_etel_701 51.39 91.89
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8. retro_etel_1014 57.14 83.78
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9. retro_etel_1025 75.32 100.00
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10. retro_etel_1735 51.35 97.30
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11. retro_etel_1966 68.06 93.24
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Download FASTA sequences of all ENSETEG00000004800 retrocopies