Parental gene: | ENSFCAG00000015735 |
| Aliases: | None |
| Description: | None |
| Organism: | Cat (Felis catus) |
| Coordinates: | D1:76416385..76425763(+) |
>ENSFCAG00000015735
ATGAGTGAGTCCTCAGGAAGTTATACTTACACCCAAACGTCAATATTATTTTTCCACGCCAAGATTCCTTTTGCTTCTAA
GTCCAATATGGCAACTCTCAAGGATCAACTGATTCAGAATCTTCTTAAGGAAGACCATACCCCCCAGAATAAGATTACAG
TCGTTGGGGTTGGTGCTGTTGGCATGGCTTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTT
GATGTCATGGAAGACAAATTGAAGGGAGAGATGATGGATCTCCAGCATGGCAGCCTATTCCTTAGAACACCAAAAATTGT
TTCTGGCAAAGACTATAATGTGACTGCAAACTCCAAGCTGGTTATTATCACAGCTGGGGCACGTCAGCAAGAGGGAGAGA
GCCGTCTTAATTTGGTCCAGCGTAATGTGAACATCTTTAAGTTCATCATTCCTAATGTTGTAAAATACAGCCCAAACTGC
AAGTTGCTTGTTGTTTCCAATCCAGTGGATATCTTGACCTATGTGGCTTGGAAGATAAGTGGCTTTCCCAAAAACCGTGT
TATTGGAAGTGGTTGCAATCTGGATTCAGCCCGGTTCCGTTACCTAATGGGGGAAAGGCTGGGAGTTCACGCATTAAGCT
GTCATGGGTGGGTCCTTGGAGAGCATGGAGACTCTAGTGTGCCTGTATGGAGTGGAGTAAATGTTGCTGGTGTCTCCCTG
AAGAATCTGCACCCTGACTTAGGCACTGATGCAGATAAGGAAAAGTGGAAAGAGGTTCACAAACAGGTGGTTGACAGTGC
CTATGAGGTGATCAAACTGAAAGGCTACACTTCCTGGGCCATTGGACTGTCTGTGGCAGATTTGGCAGAAAGCATAATGA
AGAATCTTAGGCGGGTGCATCCAATTTCCACCATGATTAAGGGTCTCTATGGAATAAAAGATGATGTCTTCCTTAGTGTT
CCTTGCATCTTGGGACAGAATGGAATCTCAGACGTTGTGAAGGTGACCCTGACTCCTGAGGAAGAGGCCCGTTTGAAGAA
GAGTGCAGATACACTCTGGGGGATCCAAAAAGAGCTGCAGTTT
ATGAGTGAGTCCTCAGGAAGTTATACTTACACCCAAACGTCAATATTATTTTTCCACGCCAAGATTCCTTTTGCTTCTAA
GTCCAATATGGCAACTCTCAAGGATCAACTGATTCAGAATCTTCTTAAGGAAGACCATACCCCCCAGAATAAGATTACAG
TCGTTGGGGTTGGTGCTGTTGGCATGGCTTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTT
GATGTCATGGAAGACAAATTGAAGGGAGAGATGATGGATCTCCAGCATGGCAGCCTATTCCTTAGAACACCAAAAATTGT
TTCTGGCAAAGACTATAATGTGACTGCAAACTCCAAGCTGGTTATTATCACAGCTGGGGCACGTCAGCAAGAGGGAGAGA
GCCGTCTTAATTTGGTCCAGCGTAATGTGAACATCTTTAAGTTCATCATTCCTAATGTTGTAAAATACAGCCCAAACTGC
AAGTTGCTTGTTGTTTCCAATCCAGTGGATATCTTGACCTATGTGGCTTGGAAGATAAGTGGCTTTCCCAAAAACCGTGT
TATTGGAAGTGGTTGCAATCTGGATTCAGCCCGGTTCCGTTACCTAATGGGGGAAAGGCTGGGAGTTCACGCATTAAGCT
GTCATGGGTGGGTCCTTGGAGAGCATGGAGACTCTAGTGTGCCTGTATGGAGTGGAGTAAATGTTGCTGGTGTCTCCCTG
AAGAATCTGCACCCTGACTTAGGCACTGATGCAGATAAGGAAAAGTGGAAAGAGGTTCACAAACAGGTGGTTGACAGTGC
CTATGAGGTGATCAAACTGAAAGGCTACACTTCCTGGGCCATTGGACTGTCTGTGGCAGATTTGGCAGAAAGCATAATGA
AGAATCTTAGGCGGGTGCATCCAATTTCCACCATGATTAAGGGTCTCTATGGAATAAAAGATGATGTCTTCCTTAGTGTT
CCTTGCATCTTGGGACAGAATGGAATCTCAGACGTTGTGAAGGTGACCCTGACTCCTGAGGAAGAGGCCCGTTTGAAGAA
GAGTGCAGATACACTCTGGGGGATCCAAAAAGAGCTGCAGTTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 655 .67 RPM |
| SRP017611_kidney | 163 .24 RPM |
| SRP017611_brain | 109 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000009211 | ortholog_one2many | 8 retrogenes | |
| Dipodomys ordii | ENSDORG00000003524 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000012639 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016343 | possible_ortholog | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000014 | possible_ortholog | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000008062 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_102 | 72.49 | 93.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_295 | 84.30 | 94.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1839 | 59.75 | 88.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_1919 | 82.63 | 58.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000015735 retrocopies