Parental gene:

PPP2CB, ENSFCAG00000025139

Aliases:None
Description:protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300]
Organism:Cat (Felis catus)
Coordinates:B1:26861446..26897458(-)


>ENSFCAG00000025139
ATGGAACTCTTTAGAATTGGTGGAAAATCACCAGATACAAACTATCTATTCATGGGCGACTATGTAGACAGGGGCTATTA
CTCAGTGGAGACTGTGACTCTTCTTGTGGCATTAAAGGTGCGTTATCCAGAGCGCATTACAATATTGAGAGGAAACCATG
AAAGCCGACAAATTACCCAAGTATATGGCTTTTATGATGAATGTCTACGAAAGTATGGAAATGCCAATGTTTGGAAATAT
TTTACAGATCTATTTGATTATCTTCCACTTACAGCTTTAGTAGATGGACAGATATTCTGCCTTCATGGTGGCCTCTCTCC
ATCCATAGATACACTGGATCATATAAGAGCCTTGGATCGTTTACAAGAAGTTCCACATGAGGGCCCAATGTGTGATCTGT
TGTGGTCAGATCCAGATGATCGTGGTGGGTGGGGTATTTCACCACGTGGTGCTGGCTACACATTTGGACAAGACATTTCT
GAAACATTTAACCATGCCAACGGTCTCACACTGGTTTCTCGAGCTCACCAACTTGTAATGGAGGGATACAATTGGTGTCA
TGATCGGAATGTGGTTACCATTTTCAGCGCACCCAATTACTGTTATCGTTGTGGGAACCAGGCTGCTATCATGGAATTAG
ATGACACTTTAAAATACTCCTTCCTTCAGTTTGACCCAGCACCTCGTCGTGGAGAGCCTCATGTTACCCGGCGCACCCCA
GACTACTTCCTGTAA

Library Parental gene expression (RPM)
SRP017611_brain 151 .73 RPM
SRP017611_kidney 88 .63 RPM
SRP017611_liver 27 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001615 ortholog_one2one 1 retrogene
retro_amel_663,
Bos taurus ENSBTAG00000009245 ortholog_one2one 3 retrogenes
retro_btau_1199, retro_btau_1750, retro_btau_704,
Dasypus novemcinctus ENSDNOG00000010906 ortholog_one2one 1 retrogene
retro_dnov_2211,
Echinops telfairi ENSETEG00000018123 ortholog_one2one 4 retrogenes
retro_etel_1607, retro_etel_1923, retro_etel_680, retro_etel_702,
Felis catus ENSFCAG00000014171 within_species_paralog 1 retrogene
retro_fcat_1043,
Felis catus ENSFCAG00000029685 within_species_paralog 1 retrogene
retro_fcat_1086,
Monodelphis domestica ENSMODG00000019001 ortholog_one2many 2 retrogenes
retro_mdom_192, retro_mdom_632,
Otolemur garnettii ENSOGAG00000002488 ortholog_one2one 1 retrogene
retro_ogar_3188,
Tursiops truncatus ENSTTRG00000000102 ortholog_one2one 1 retrogene
retro_ttru_1576,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1884 70.97 75.00
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Download FASTA sequences of all ENSFCAG00000025139 retrocopies