Parental gene:

PPP2CA, ENSFCAG00000029685

Aliases:None
Description:protein phosphatase 2, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9299]
Organism:Cat (Felis catus)
Coordinates:A1:111704026..111733069(-)


>ENSFCAG00000029685
ATGGACGAGAAGGTGTTCACCAAGGAGCTGGACCAGTGGATCGAGCAGCTGAATGAGTGCAAGCAGCTGTCCGAGTCCCA
GGTCAAGAGCCTCTGCGAGAAGGCTAAAGAAATCCTGACAAAAGAATCCAACGTGCAAGAGGTTCGATGTCCAGTCACCG
TCTGTGGAGATGTGCATGGGCAATTTCATGATCTTATGGAACTGTTTAGAATTGGTGGCAAATCACCAGATACGAACTAC
TTGTTTATGGGAGATTATGTTGACAGAGGATATTACTCAGTTGAAACCGTTACTCTGCTTGTAGCTCTTAAGGTTCGTTA
CCGTGAGCGCATCACCATTCTTCGAGGAAATCATGAGAGCAGACAGATCACACAAGTATATGGTTTCTATGATGAGTGTT
TAAGGAAATACGGAAATGCAAATGTTTGGAAATATTTCACAGATCTTTTTGACTATCTTCCTCTTACAGCATTGGTGGAT
GGGCAGATATTCTGTCTACATGGCGGCCTGTCACCATCCATAGATACACTGGATCACATCAGAGCACTTGATCGCCTACA
AGAAGTTCCTCATGAGGGTCCAATGTGTGACTTGCTGTGGTCAGATCCAGATGATCGTGGTGGTTGGGGTATATCTCCTC
GAGGAGCTGGTTACACCTTTGGCCAAGACATTTCTGAAACATTTAATCATGCCAATGGCCTCACATTGGTGTCCAGAGCT
CACCAGCTGGTGATGGAGGGGTATAACTGGTGCCACGACCGGAATGTAGTAACAATTTTCAGTGCTCCAAACTATTGTTA
TCGTTGTGGTAATCAAGCTGCAATCATGGAACTTGATGATACTCTAAAATACTCTTTCTTGCAGTTTGACCCAGCACCTC
GCAGAGGCGAGCCACATGTTACTCGTCGTACCCCAGACTACTTCCTGTAA

Library Parental gene expression (RPM)
SRP017611_brain 206 .36 RPM
SRP017611_kidney 112 .75 RPM
SRP017611_liver 64 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002653 ortholog_one2one 1 retrogene
retro_acar_69,
Bos taurus ENSBTAG00000000469 ortholog_one2one 1 retrogene
retro_btau_1754,
Dasypus novemcinctus ENSDNOG00000013011 ortholog_one2one 4 retrogenes
retro_dnov_1025, retro_dnov_1844, retro_dnov_2100, retro_dnov_2122,
Echinops telfairi ENSETEG00000007561 ortholog_one2one 2 retrogenes
retro_etel_1233, retro_etel_659,
Felis catus ENSFCAG00000014171 within_species_paralog 1 retrogene
retro_fcat_1043,
Felis catus ENSFCAG00000025139 within_species_paralog 1 retrogene
retro_fcat_1884,
Mustela putorius furo ENSMPUG00000010169 ortholog_one2one 1 retrogene
retro_mputfur_633,
Sorex araneus ENSSARG00000005447 ortholog_one2one 3 retrogenes
retro_sara_296, retro_sara_385, retro_sara_715,
Sarcophilus harrisii ENSSHAG00000016632 ortholog_one2one 3 retrogenes
retro_shar_313, retro_shar_428, retro_shar_471,
Tursiops truncatus ENSTTRG00000016859 ortholog_one2one 1 retrogene
retro_ttru_1584,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1086 79.27 88.35
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Download FASTA sequences of all ENSFCAG00000029685 retrocopies