Parental gene:

ATXN3, ENSG00000066427

Aliases:ATXN3, AT3, ATX3, JOS, MJD, MJD1, SCA3
Description:ataxin 3 [Source:HGNC Symbol;Acc:7106]
Organism:Human (Homo sapiens)
Coordinates:14:92524895..92572965(-)


>ENSG00000066427
ATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAACTTATTGCAAGGAGAATA
TTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGCTGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTA
CTAGTGAAGATTATCGCACGTTTTTACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGGTTATA
AGCAATGCCTTGAAAGTTTGGGGTTTAGAACTAATCCTGTTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCTAT
AAATGAAAGATCATTTATATGCAATTATAAGGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGA
ATTCTCTCTTGACGGGTCCAGAATTAATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTAT
TCTATATTTGTCGTTAAGGGTGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCA
TCGACCAAAACTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAG
AAGCAAATGATGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATT
GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGA
TATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCAGC
AAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAGGCCAGCC
ACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTC
TTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAA

Library Parental gene expression (RPM)
bodymap2_adipose 18 .33 RPM
bodymap2_adrenal 28 .94 RPM
bodymap2_brain 16 .71 RPM
bodymap2_breast 39 .61 RPM
bodymap2_colon 21 .98 RPM
bodymap2_heart 13 .00 RPM
bodymap2_kidney 21 .61 RPM
bodymap2_liver 6 .67 RPM
bodymap2_lung 17 .95 RPM
bodymap2_lymph_node 29 .16 RPM
bodymap2_ovary 27 .22 RPM
bodymap2_prostate 28 .23 RPM
bodymap2_skeletal_muscle 5 .35 RPM
bodymap2_testis 35 .63 RPM
bodymap2_thyroid 20 .34 RPM
bodymap2_white_blood_cells 42 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005786 ortholog_one2one 2 retrogenes
retro_btau_1652, retro_btau_330,
Choloepus hoffmanni ENSCHOG00000005302 ortholog_one2one 1 retrogene
retro_chof_2238,
Callithrix jacchus ENSCJAG00000018025 possible_ortholog 2 retrogenes
retro_cjac_1724, retro_cjac_375,
Cavia porcellus ENSCPOG00000010887 ortholog_one2many 1 retrogene
retro_cpor_1460,
Macaca mulatta ENSMMUG00000020751 ortholog_one2one 1 retrogene
retro_mmul_298,
Monodelphis domestica ENSMODG00000002006 ortholog_one2many 2 retrogenes
retro_mdom_1498, retro_mdom_1573,
Nomascus leucogenys ENSNLEG00000017126 ortholog_one2one 1 retrogene
retro_nleu_66,
Pongo abelii ENSPPYG00000006075 ortholog_one2one 1 retrogene
retro_pabe_9,
Tupaia belangeri ENSTBEG00000008099 ortholog_one2one 3 retrogenes
retro_tbel_102, retro_tbel_2635, retro_tbel_3925,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_89 69.81 100.00
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Download FASTA sequences of all ENSG00000066427 retrocopies