Parental gene: | ATXN3, ENSTBEG00000008099 |
| Aliases: | None |
| Description: | ataxin 3 [Source:HGNC Symbol;Acc:7106] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_358:37259..78137(-) |
>ENSTBEG00000008099
CAAGAAGGCTCACTTTGTGCTCAGCATTGCCTGAATAATCTGTTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTC
AATTGCACATCAGCTAGATGAAGAAGAGAGGATGAGAATGGCAGAAGGAGGAGTCACTAGTGAAGACTATCGCACATTTT
TACAGCAGCCTTCTGGGAACATGGATGACAGCGGTTTTTTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGT
TTAGAACTAATCCTATTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCCATAAATGAAAGATCATTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAAT
TAATATCAGATACATACCTTGCACTTTTCTTGGCTCAGTTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGAT
CTGCCGGATTGTGAAGCTGACCAACTCTTACAGATGATCAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGA
ATTAGCACAACTAAAAGATCAGAGAGTCCATAAAACAGACCTAGAACGAGTCTTAGAAGCAAATGATGGGTCAGGAATGT
TAGACGAAGATGAGGAGGATTTGCAGAGGGCCCTGGCACTAAGTCGCCAAGAAATTGACATGGAGGATGAAGAAGCAGAT
CTCCGCAGGGCTATTCAGCTCAGTATGCAAGGTAGTTCCAGAAATATATCTCAAGATAGTCCACAGATGTCAAGCACAAA
TCTTACTTCAGAAGAGTTGCGGAAGAGAAGAGAAGCCTACTTTGAAAAGCAGCAGCAGCAGCACCAACAGCAGCAGCAGC
AGCAGCCACCAGGACAGGTCTCTCATCCATGTGGAAAGCCGACCACGAGTTCAGGAGCATTCGGGAACGATCTCGGCGAT
GATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCCGTCACCTTGTCTTTGGAAACTGTTAGAAATAATTTGAAAACTGA
AGGAAAGAAATAA
CAAGAAGGCTCACTTTGTGCTCAGCATTGCCTGAATAATCTGTTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTC
AATTGCACATCAGCTAGATGAAGAAGAGAGGATGAGAATGGCAGAAGGAGGAGTCACTAGTGAAGACTATCGCACATTTT
TACAGCAGCCTTCTGGGAACATGGATGACAGCGGTTTTTTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGT
TTAGAACTAATCCTATTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCCATAAATGAAAGATCATTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAAT
TAATATCAGATACATACCTTGCACTTTTCTTGGCTCAGTTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGAT
CTGCCGGATTGTGAAGCTGACCAACTCTTACAGATGATCAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGA
ATTAGCACAACTAAAAGATCAGAGAGTCCATAAAACAGACCTAGAACGAGTCTTAGAAGCAAATGATGGGTCAGGAATGT
TAGACGAAGATGAGGAGGATTTGCAGAGGGCCCTGGCACTAAGTCGCCAAGAAATTGACATGGAGGATGAAGAAGCAGAT
CTCCGCAGGGCTATTCAGCTCAGTATGCAAGGTAGTTCCAGAAATATATCTCAAGATAGTCCACAGATGTCAAGCACAAA
TCTTACTTCAGAAGAGTTGCGGAAGAGAAGAGAAGCCTACTTTGAAAAGCAGCAGCAGCAGCACCAACAGCAGCAGCAGC
AGCAGCCACCAGGACAGGTCTCTCATCCATGTGGAAAGCCGACCACGAGTTCAGGAGCATTCGGGAACGATCTCGGCGAT
GATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCCGTCACCTTGTCTTTGGAAACTGTTAGAAATAATTTGAAAACTGA
AGGAAAGAAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005786 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005302 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018025 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000010887 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000066427 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020751 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002006 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017126 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006075 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_102 | 70.56 | 65.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_2635 | 74.79 | 65.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_3925 | 74.60 | 53.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000008099 retrocopies