Parental gene:

ATXN3, ENSPPYG00000006075

Aliases:None
Description:ataxin 3 [Source:HGNC Symbol;Acc:7106]
Organism:Orangutan (Pongo abelii)
Coordinates:14:93360677..93404545(-)


>ENSPPYG00000006075
ATGGAGTCCATCTTCCACGAGAAACAGTTGGAAGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTAGTAGTGAAGT
TTTTCGCACATTTTTACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGGTTATAAGCAATGCCT
TGAAAGTTTGGGGTTTAGAACTAATCCTGTTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCTATAAATGAAAGA
TCATTTATATGCAATTATAAGGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTT
GACGGGTCCAGAATTAATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTG
TTGTTAAGGGTGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCACCGACCAAAA
CTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGA
TGGCTCAGGAATGTTAGACGAAGACGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAG
ATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAATATATCTCAAGATATTCCACAG
ACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCA
ACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAGGCCAACCACCAGTTCAG
GAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACT
GTCAGAAATGATTTGAAAACAGAAGGAAAAAAAAAATACCTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .18 RPM
SRP007412_cerebellum 6 .44 RPM
SRP007412_heart 3 .46 RPM
SRP007412_kidney 5 .24 RPM
SRP007412_liver 4 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005786 ortholog_one2one 2 retrogenes
retro_btau_1652, retro_btau_330,
Choloepus hoffmanni ENSCHOG00000005302 ortholog_one2one 1 retrogene
retro_chof_2238,
Callithrix jacchus ENSCJAG00000018025 possible_ortholog 2 retrogenes
retro_cjac_1724, retro_cjac_375,
Cavia porcellus ENSCPOG00000010887 ortholog_one2many 1 retrogene
retro_cpor_1460,
Homo sapiens ENSG00000066427 ortholog_one2one 1 retrogene
retro_hsap_89,
Macaca mulatta ENSMMUG00000020751 ortholog_one2one 1 retrogene
retro_mmul_298,
Monodelphis domestica ENSMODG00000002006 ortholog_one2many 2 retrogenes
retro_mdom_1498, retro_mdom_1573,
Nomascus leucogenys ENSNLEG00000017126 ortholog_one2one 1 retrogene
retro_nleu_66,
Tupaia belangeri ENSTBEG00000008099 ortholog_one2one 3 retrogenes
retro_tbel_102, retro_tbel_2635, retro_tbel_3925,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_9 66.87 96.71
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Download FASTA sequences of all ENSPPYG00000006075 retrocopies