Parental gene:

CBX5, ENSG00000094916

Aliases:CBX5, HEL25, HP1, HP1A
Description:chromobox homolog 5 [Source:HGNC Symbol;Acc:1555]
Organism:Human (Homo sapiens)
Coordinates:12:54624723..54673886(-)


>ENSG00000094916
ATGGGAAAGAAAACCAAGCGGACAGCTGACAGTTCTTCTTCAGAGGATGAGGAGGAGTATGTTGTGGAGAAGGTGCTAGA
CAGGCGCGTGGTTAAGGGACAAGTGGAATATCTACTGAAGTGGAAAGGCTTTTCTGAGGAGCACAATACTTGGGAACCTG
AGAAAAACTTGGATTGCCCTGAGCTAATTTCTGAATTTATGAAAAAGTATAAGAAGATGAAGGAGGGTGAAAATAATAAA
CCCAGGGAGAAGTCAGAAAGTAACAAGAGGAAATCCAATTTCTCAAACAGTGCCGATGACATCAAATCTAAAAAAAAGAG
AGAGCAGAGCAATGATATCGCTCGGGGCTTTGAGAGAGGACTGGAACCAGAAAAGATCATTGGGGCAACAGATTCCTGTG
GTGATTTAATGTTCCTAATGAAATGGAAAGACACAGATGAAGCTGACCTGGTTCTTGCAAAAGAAGCTAATGTGAAATGT
CCACAAATTGTGATAGCATTTTATGAAGAGAGACTGACATGGCATGCATATCCTGAGGATGCGGAAAACAAAGAGAAAGA
AACAGCAAAGAGCTAA

Library Parental gene expression (RPM)
bodymap2_liver 38 .40 RPM
bodymap2_lung 77 .81 RPM
bodymap2_breast 126 .07 RPM
bodymap2_adipose 108 .37 RPM
bodymap2_adrenal 130 .00 RPM
bodymap2_skeletal_muscle 34 .98 RPM
bodymap2_thyroid 164 .55 RPM
bodymap2_prostate 78 .48 RPM
bodymap2_colon 96 .49 RPM
bodymap2_testis 170 .26 RPM
bodymap2_brain 239 .16 RPM
bodymap2_heart 95 .20 RPM
bodymap2_white_blood_cells 99 .01 RPM
bodymap2_lymph_node 130 .20 RPM
bodymap2_ovary 382 .55 RPM
bodymap2_kidney 178 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018847 ortholog_one2one 1 retrogene
retro_cjac_2020,
Echinops telfairi ENSETEG00000001220 ortholog_one2one 1 retrogene
retro_etel_678,
Homo sapiens ENSG00000108468 within_species_paralog 3 retrogenes
retro_hsap_4654, retro_hsap_4790, retro_hsap_4840,
Homo sapiens ENSG00000122565 within_species_paralog 9 retrogenes
retro_hsap_1071, retro_hsap_1145, retro_hsap_1902, retro_hsap_2332, retro_hsap_2771, retro_hsap_3368, retro_hsap_3650, retro_hsap_766, retro_hsap_910,
Gorilla gorilla ENSGGOG00000000041 ortholog_one2one 1 retrogene
retro_ggor_1955,
Nomascus leucogenys ENSNLEG00000017671 ortholog_one2one 1 retrogene
retro_nleu_428,
Pongo abelii ENSPPYG00000004599 ortholog_one2one 1 retrogene
retro_pabe_2307,
Pan troglodytes ENSPTRG00000005034 ortholog_one2one 1 retrogene
retro_ptro_1905,
Tursiops truncatus ENSTTRG00000004524 ortholog_one2one 1 retrogene
retro_ttru_1859,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2811 68.06 74.87
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Download FASTA sequences of all ENSG00000094916 retrocopies