Parental gene:

SPIN1, ENSG00000106723

Aliases:SPIN1, SPIN
Description:spindlin 1 [Source:HGNC Symbol;Acc:11243]
Organism:Human (Homo sapiens)
Coordinates:9:91003333..91093609(+)


>ENSG00000106723
ATGAAGACCCCATTCGGAAAGACACCTGGCCAGCGGTCCAGAGCTGATGCAGGCCATGCTGGAGTATCTGCCAACATGAT
GAAGAAGAGGACATCCCACAAAAAACATCGGAGCAGTGTGGGTCCGAGCAAACCTGTTTCCCAGCCCCGGCGGAACATCG
TAGGCTGCAGGATTCAGCATGGGTGGAAAGAGGGGAATGGCCCTGTTACCCAGTGGAAAGGAACCGTTCTGGACCAGGTG
CCTGTAAATCCTTCTTTGTATCTTATAAAATACGATGGATTTGACTGTGTTTATGGACTAGAACTTAATAAAGATGAAAG
AGTTTCTGCGCTTGAAGTCCTCCCTGATAGAGTTGCGACATCTCGAATCAGCGATGCACACTTGGCAGACACAATGATTG
GCAAAGCAGTGGAACATATGTTTGAGACAGAGGATGGTTCTAAAGATGAGTGGAGGGGAATGGTCTTAGCACGTGCACCT
GTCATGAACACATGGTTTTACATTACCTATGAGAAAGACCCTGTCTTGTACATGTACCAACTCTTAGATGATTACAAAGA
AGGCGACCTTCGCATTATGCCTGATTCCAATGATTCACCTCCAGCAGAAAGGGAACCAGGAGAAGTTGTGGACAGCCTGG
TAGGCAAACAAGTGGAATATGCCAAAGAAGATGGCTCGAAAAGGACTGGCATGGTCATTCATCAAGTAGAAGCCAAGCCC
TCCGTCTATTTCATCAAGTTTGATGATGATTTCCATATTTATGTCTACGATTTGGTGAAAACATCCTAG

Library Parental gene expression (RPM)
bodymap2_adipose 112 .71 RPM
bodymap2_adrenal 82 .70 RPM
bodymap2_brain 222 .99 RPM
bodymap2_breast 126 .09 RPM
bodymap2_colon 132 .51 RPM
bodymap2_heart 70 .69 RPM
bodymap2_kidney 138 .17 RPM
bodymap2_liver 28 .07 RPM
bodymap2_lung 98 .00 RPM
bodymap2_lymph_node 85 .01 RPM
bodymap2_ovary 291 .62 RPM
bodymap2_prostate 142 .53 RPM
bodymap2_skeletal_muscle 12 .73 RPM
bodymap2_testis 234 .36 RPM
bodymap2_thyroid 129 .35 RPM
bodymap2_white_blood_cells 65 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003301 ortholog_one2one 4 retrogenes
retro_amel_1831, retro_amel_1879, retro_amel_38, retro_amel_41,
Bos taurus ENSBTAG00000003044 ortholog_one2one 4 retrogenes
retro_btau_1678, retro_btau_1841, retro_btau_187, retro_btau_553,
Canis familiaris ENSCAFG00000002208 ortholog_one2one 3 retrogenes
retro_cfam_153, retro_cfam_2095, retro_cfam_59,
Choloepus hoffmanni ENSCHOG00000006983 ortholog_one2one 2 retrogenes
retro_chof_1343, retro_chof_1852,
Callithrix jacchus ENSCJAG00000017452 ortholog_one2one 1 retrogene
retro_cjac_227,
Cavia porcellus ENSCPOG00000000743 ortholog_one2one 1 retrogene
retro_cpor_123,
Echinops telfairi ENSETEG00000013719 ortholog_one2one 1 retrogene
retro_etel_28,
Felis catus ENSFCAG00000007197 ortholog_one2one 2 retrogenes
retro_fcat_32, retro_fcat_70,
Loxodonta africana ENSLAFG00000027497 ortholog_one2one 2 retrogenes
retro_lafr_18, retro_lafr_58,
Microcebus murinus ENSMICG00000014510 ortholog_one2one 1 retrogene
retro_mmur_8,
Myotis lucifugus ENSMLUG00000008516 ortholog_one2one 2 retrogenes
retro_mluc_132, retro_mluc_1626,
Mustela putorius furo ENSMPUG00000008585 ortholog_one2one 1 retrogene
retro_mputfur_139,
Mus musculus ENSMUSG00000021395 ortholog_one2one 3 retrogenes
retro_mmus_112, retro_mmus_16, retro_mmus_3351,
Oryctolagus cuniculus ENSOCUG00000011880 ortholog_one2many 1 retrogene
retro_ocun_63,
Otolemur garnettii ENSOGAG00000002166 ortholog_one2one 2 retrogenes
retro_ogar_2327, retro_ogar_9,
Procavia capensis ENSPCAG00000015800 ortholog_one2one 1 retrogene
retro_pcap_14,
Pongo abelii ENSPPYG00000019355 ortholog_one2one 1 retrogene
retro_pabe_33,
Pan troglodytes ENSPTRG00000021088 ortholog_one2one 2 retrogenes
retro_ptro_116, retro_ptro_95,
Pteropus vampyrus ENSPVAG00000013391 ortholog_one2one 3 retrogenes
retro_pvam_2, retro_pvam_22, retro_pvam_858,
Rattus norvegicus ENSRNOG00000011119 ortholog_one2many 4 retrogenes
retro_rnor_1483, retro_rnor_1531, retro_rnor_281, retro_rnor_2818,
Ictidomys tridecemlineatus ENSSTOG00000029107 ortholog_one2one 1 retrogene
retro_itri_136,
Tursiops truncatus ENSTTRG00000005602 ortholog_one2one 6 retrogenes
retro_ttru_1061, retro_ttru_13, retro_ttru_1452, retro_ttru_1506, retro_ttru_1669, retro_ttru_1698,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_64 77.10 100.00
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Download FASTA sequences of all ENSG00000106723 retrocopies