Parental gene:

VPS26A, ENSG00000122958

Aliases:VPS26A, HB58, Hbeta58, PEP8A, VPS26
Description:vacuolar protein sorting 26 homolog A (S. pombe) [Source:HGNC Symbol;Acc:12711]
Organism:Human (Homo sapiens)
Coordinates:10:70883267..70932617(+)


>ENSG00000122958
ATGAGTTTTCTTGGAGGCTTTTTTGGTCCAATTTGTGAGATCGATATTGTTCTTAATGATGGGGAAACCAGGAAAATGGC
AGAAATGAAAACTGAAGATGGCAAAGTAGAAAAACACTATCTCTTCTATGACGGAGAATCCGTTTCAGGAAAGGTAAACC
TAGCCTTTAAGCAACCTGGAAAGAGGCTAGAACACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGAACTTTTCAAT
GACAAGAGTAATACTCATGAATTTGTAAACCTAGTGAAAGAACTAGCCTTACCTGGAGAACTGACTCAGAGCAGAAGTTA
TGATTTTGAATTTATGCAAGTTGAAAAGCCATATGAATCTTACATCGGTGCCAATGTCCGCTTGAGGTATTTTCTTAAAG
TGACAATAGTGAGAAGACTGACAGATTTGGTAAAAGAGTATGATCTTATTGTTCACCAGCTTGCCACCTATCCTGATGTT
AACAACTCTATTAAGATGGAAGTGGGCATTGAAGATTGTCTACATATAGAATTTGAATATAATAAATCAAAGTATCATTT
AAAGGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTAAGAATAAAAATACAACATATGGAGTTACAGCTGATCAAAA
AAGAGATCACAGGAATTGGACCCAGTACCACAACAGAAACAGAAACAATCGCCAAATATGAAATAATGGATGGTGCACCA
GTAAAAGGTGAATCAATTCCAATAAGGCTATTTTTAGCAGGATATGACCCAACTCCAACAATGAGAGATGTGAACAAAAA
ATTTTCAGTAAGGTACTTTTTGAATTTAGTGCTTGTTGATGAGGAAGACCGGAGGTACTTCAAACAGCAGGAGATAATTT
TATGGAGAAAAGCTCCTGAAAAACTGAGGAAACAGAGAACAAACTTTCACCAGCGATTTGAATCTCCAGAATCACAGGCA
TCTGCCGAACAGCCTGAAATGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 85 .65 RPM
bodymap2_adrenal 68 .86 RPM
bodymap2_brain 81 .71 RPM
bodymap2_breast 110 .68 RPM
bodymap2_colon 97 .94 RPM
bodymap2_heart 55 .86 RPM
bodymap2_kidney 97 .20 RPM
bodymap2_liver 37 .47 RPM
bodymap2_lung 85 .43 RPM
bodymap2_lymph_node 62 .68 RPM
bodymap2_ovary 100 .59 RPM
bodymap2_prostate 109 .12 RPM
bodymap2_skeletal_muscle 54 .45 RPM
bodymap2_testis 130 .37 RPM
bodymap2_thyroid 98 .00 RPM
bodymap2_white_blood_cells 82 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013827 ortholog_one2one 1 retrogene
retro_cfam_1133,
Choloepus hoffmanni ENSCHOG00000007324 ortholog_one2one 5 retrogenes
retro_chof_1303, retro_chof_1663, retro_chof_1796, retro_chof_2352, retro_chof_242,
Callithrix jacchus ENSCJAG00000012907 ortholog_one2one 1 retrogene
retro_cjac_1420,
Equus caballus ENSECAG00000009507 ortholog_one2many 1 retrogene
retro_ecab_17,
Gorilla gorilla ENSGGOG00000010433 ortholog_one2one 1 retrogene
retro_ggor_1875,
Microcebus murinus ENSMICG00000014940 ortholog_one2one 1 retrogene
retro_mmur_1070,
Mustela putorius furo ENSMPUG00000004519 ortholog_one2many 1 retrogene
retro_mputfur_146,
Nomascus leucogenys ENSNLEG00000011548 ortholog_one2one 1 retrogene
retro_nleu_1187,
Pongo abelii ENSPPYG00000002386 ortholog_one2one 1 retrogene
retro_pabe_2293,
Pan troglodytes ENSPTRG00000002567 ortholog_one2one 3 retrogenes
retro_ptro_1815, retro_ptro_2245, retro_ptro_4,
Tupaia belangeri ENSTBEG00000015348 ortholog_one2one 1 retrogene
retro_tbel_1425,
Vicugna pacos ENSVPAG00000000630 ortholog_one2one 1 retrogene
retro_vpac_385,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2688 85.24 100.00
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Download FASTA sequences of all ENSG00000122958 retrocopies