Parental gene:

GOT2, ENSG00000125166

Aliases:GOT2, KAT4, KATIV, mitAAT
Description:glutamic-oxaloacetic transaminase 2, mitochondrial [Source:HGNC Symbol;Acc:4433]
Organism:Human (Homo sapiens)
Coordinates:16:58741034..58768261(-)


>ENSG00000125166
ATGGCCCTGCTGCACTCCGGCCGCGTCCTCCCCGGGATCGCCGCCGCCTTCCACCCGGGCCTCGCCGCCGCGGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTGGAAATGGGACCTCCAGATCCCATTCTGGGAGTCACTGAAGCCTTTAAGAGGG
ACACCAATAGCAAAAAGATGAATCTGGGAGTTGGTGCCTACCGGGATGATAATGGAAAGCCTTACGTTCTGCCTAGCGTC
CGCAAGGCAGAGGCCCAGATTGCCGCAAAAAATTTGGACAAGGAATACCTGCCCATTGGGGGACTGGCTGAATTTTGCAA
GGCATCTGCAGAACTAGCCCTGGGTGAGAACAGCGAAGTCTTGAAGAGTGGCCGGTTTGTCACTGTGCAGACCATTTCTG
GAACTGGAGCCTTAAGGATCGGAGCCAGTTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
ACCTGGGGAAACCACACACCCATCTTCAGGGATGCTGGCATGCAGCTACAAGGTTATCGGTATTATGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCTGTGGAGGATATTTCAAAAATACCAGAGCAGAGTGTTCTTCTTCTGCATGCCTGCGCCC
ACAATCCCACGGGAGTGGACCCGCGTCCGGAACAGTGGAAGGAAATAGCAACAGTGGTGAAGAAAAGGAATCTCTTTGCG
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGATGGTGATAAGGATGCCTGGGCTGTGCGCCACTTCATCGAACA
GGGCATTAATGTTTGCCTCTGCCAATCATATGCCAAGAACATGGGCTTATATGGTGAGCGTGTAGGAGCCTTCACTATGG
TCTGCAAAGATGCGGATGAAGCCAAAAGGGTAGAGTCACAGTTGAAGATCTTGATCCGTCCCATGTATTCCAACCCTCCC
CTCAATGGGGCCCGGATTGCTGCTGCCATTCTGAACACCCCAGATTTGCGAAAACAATGGCTGCAAGAAGTGAAAGTCAT
GGCTGACCGCATCATTGGCATGCGGACTCAACTGGTCTCCAACCTCAAGAAGGAGGGTTCCACCCACAATTGGCAACACA
TCACCGACCAAATTGGCATGTTCTGTTTCACAGGGCTAAAGCCTGAACAGGTGGAGCGGCTGATCAAGGAGTTCTCCATC
TACATGACAAAAGATGGCCGCATCTCTGTGGCAGGGGTCACCTCCAGCAACGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA

Library Parental gene expression (RPM)
bodymap2_adipose 45 .34 RPM
bodymap2_adrenal 62 .88 RPM
bodymap2_brain 124 .49 RPM
bodymap2_breast 35 .53 RPM
bodymap2_colon 59 .05 RPM
bodymap2_heart 441 .02 RPM
bodymap2_kidney 146 .98 RPM
bodymap2_liver 199 .66 RPM
bodymap2_lung 44 .67 RPM
bodymap2_lymph_node 56 .81 RPM
bodymap2_ovary 75 .12 RPM
bodymap2_prostate 108 .48 RPM
bodymap2_skeletal_muscle 198 .41 RPM
bodymap2_testis 70 .04 RPM
bodymap2_thyroid 113 .35 RPM
bodymap2_white_blood_cells 47 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017346 possible_ortholog 3 retrogenes
retro_amel_1805, retro_amel_815, retro_amel_846,
Canis familiaris ENSCAFG00000008357 possible_ortholog 2 retrogenes
retro_cfam_586, retro_cfam_816,
Callithrix jacchus ENSCJAG00000011234 ortholog_one2one 1 retrogene
retro_cjac_2916,
Gorilla gorilla ENSGGOG00000005767 ortholog_one2one 3 retrogenes
retro_ggor_2912, retro_ggor_449, retro_ggor_774,
Microcebus murinus ENSMICG00000008954 ortholog_one2one 1 retrogene
retro_mmur_480,
Macaca mulatta ENSMMUG00000006000 ortholog_one2one 1 retrogene
retro_mmul_1337,
Mustela putorius furo ENSMPUG00000004862 possible_ortholog 1 retrogene
retro_mputfur_567,
Pongo abelii ENSPPYG00000007413 ortholog_one2one 3 retrogenes
retro_pabe_3640, retro_pabe_823, retro_pabe_901,
Pan troglodytes ENSPTRG00000008185 ortholog_one2one 4 retrogenes
retro_ptro_3115, retro_ptro_354, retro_ptro_665, retro_ptro_670,
Rattus norvegicus ENSRNOG00000011782 possible_ortholog 1 retrogene
retro_rnor_2695,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_473 84.72 50.23
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2. retro_hsap_960 81.11 100.00
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3. retro_hsap_971 82.01 55.35
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4. retro_hsap_4687 74.90 55.12
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Download FASTA sequences of all ENSG00000125166 retrocopies