Parental gene:

GOT2, ENSCJAG00000011234

Aliases:None
Description:glutamic-oxaloacetic transaminase 2, mitochondrial [Source:HGNC Symbol;Acc:4433]
Organism:Marmoset (Callithrix jacchus)
Coordinates:20:12728664..12756214(-)


>ENSCJAG00000011234
ATGGCCCTGCTGCACTCCCGCCGCGTCCTCTCCGGCATCGCCGCCGCCTTCCACCCGGGCCTCGCCGCCGCGGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTGGAAATGGGACCTCCAGATCCCATCCTGGGAGTCACTGAAGCCTTTAAGAGGG
ACACCAACAGCAAAAAGATGAATCTGGGAGTTGGTGCCTACCGGGATGATAACGGAAAGCCTTACGTGCTGCCTAGTGTC
CGCAAGGCAGAGGCCCAAATTGCCGCAAAAAGTTTGGACAAGGAGTACCTGCCCATCGGGGGACTGGCGGAATTTTGCAA
GGCATCTGCACAACTAGCCCTGGGTGAGAACAGCGAAGTCGTGAAAAGTGGCCGGTTTGTCACTGTGCAGACCATTTCTG
GAACTGGAGCTTTAAGGATCGGAGCCAGTTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
AGCTGGGGAAATCACACACCCATCTTCAGGGACGCTGGCATGCAGCTACAAGGTTATCGGTATTACGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCTATGGAGGACATTTCAAAAATACCAGAGCAAAGTGTTGTTCTTCTGCATGCCTGTGCCC
ACAATCCCACGGGAGTGGACCCGCGTCCGGAACAGTGGAAGGAAATAGCAGCAGTGGTGAAGAAAAGGAATCTCTTTGCC
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGACGGTGATAAGGATGCCTGGGCTGTGCGCCACTTCATTGAACA
GGGCATTAATGTTTGTCTCTGTCAATCATATGCCAAGAACATGGGCTTATATGGTGAGCGTGTAGGAGCCTTCACTATGA
TCTGCAAAGATGCAGATGAAGCGAAAAGGGTGGAGTCACAGTTGAAGATCTTGATCCGTCCCATGTATTCCAACCCTCCC
CTCAATGGGGCCCGGATTGCTGCTGCCATTCTGAACACCCCAGATTTGCGAAAACAATGGTTGCAAGAAGTGAAAGGCAT
GGCCGACCGCATCATTAGCATGCGGACGCAGCTGGTCTCCAACCTCAAGAAGGAGGGCTCCACCCACAACTGGCAACACA
TCAGCGACCAAATTGGCATGTTTTGTTTCACAGGGCTAAAGCCTGAACAGGTGGAGAGGTTGACCAAGGAGTTCTCCATC
TACATGACAAAGGATGGCCGCATCTCTGTGGCCGGGGTCACCTCCAGCAACGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA

Library Parental gene expression (RPM)
SRP051959_colon 26 .00 RPM
SRP051959_heart 105 .66 RPM
SRP051959_kidney 75 .90 RPM
SRP051959_liver 104 .79 RPM
SRP051959_lung 13 .86 RPM
SRP051959_lymph_node 9 .29 RPM
SRP051959_skeletal_muscle 128 .30 RPM
SRP051959_spleen 12 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017346 possible_ortholog 3 retrogenes
retro_amel_1805, retro_amel_815, retro_amel_846,
Canis familiaris ENSCAFG00000008357 possible_ortholog 2 retrogenes
retro_cfam_586, retro_cfam_816,
Equus caballus ENSECAG00000016504 possible_ortholog 1 retrogene
retro_ecab_694,
Felis catus ENSFCAG00000025552 possible_ortholog 3 retrogenes
retro_fcat_1068, retro_fcat_1888, retro_fcat_381,
Homo sapiens ENSG00000125166 ortholog_one2one 4 retrogenes
retro_hsap_4687, retro_hsap_473, retro_hsap_960, retro_hsap_971,
Gorilla gorilla ENSGGOG00000005767 ortholog_one2one 3 retrogenes
retro_ggor_2912, retro_ggor_449, retro_ggor_774,
Macropus eugenii ENSMEUG00000012574 possible_ortholog 1 retrogene
retro_meug_2109,
Microcebus murinus ENSMICG00000008954 ortholog_one2many 1 retrogene
retro_mmur_480,
Macaca mulatta ENSMMUG00000006000 ortholog_one2one 1 retrogene
retro_mmul_1337,
Mustela putorius furo ENSMPUG00000004862 possible_ortholog 1 retrogene
retro_mputfur_567,
Mus musculus ENSMUSG00000031672 possible_ortholog 1 retrogene
retro_mmus_2701,
Oryctolagus cuniculus ENSOCUG00000003871 possible_ortholog 1 retrogene
retro_ocun_1516,
Otolemur garnettii ENSOGAG00000000551 possible_ortholog 2 retrogenes
retro_ogar_2182, retro_ogar_827,
Pongo abelii ENSPPYG00000007413 ortholog_one2one 3 retrogenes
retro_pabe_3640, retro_pabe_823, retro_pabe_901,
Pan troglodytes ENSPTRG00000008185 ortholog_one2one 4 retrogenes
retro_ptro_3115, retro_ptro_354, retro_ptro_665, retro_ptro_670,
Rattus norvegicus ENSRNOG00000011782 possible_ortholog 1 retrogene
retro_rnor_2695,
Tupaia belangeri ENSTBEG00000001808 possible_ortholog 1 retrogene
retro_tbel_3799,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2916 69.61 70.23
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Download FASTA sequences of all ENSCJAG00000011234 retrocopies