Parental gene: | SDCBP, ENSG00000137575 |
Aliases: | SDCBP, MDA-9, ST1, SYCL, TACIP18 |
Description: | syndecan binding protein (syntenin) [Source:HGNC Symbol;Acc:10662] |
Organism: | Human (Homo sapiens) |
Coordinates: | 8:59465482..59495419(+) |
Library | Parental gene expression (RPM) |
---|---|
bodymap2_liver | 77 .48 RPM |
bodymap2_lung | 592 .44 RPM |
bodymap2_breast | 291 .15 RPM |
bodymap2_adipose | 454 .71 RPM |
bodymap2_adrenal | 260 .60 RPM |
bodymap2_skeletal_muscle | 71 .77 RPM |
bodymap2_thyroid | 186 .32 RPM |
bodymap2_prostate | 248 .23 RPM |
bodymap2_colon | 376 .18 RPM |
bodymap2_testis | 178 .84 RPM |
bodymap2_brain | 171 .89 RPM |
bodymap2_heart | 155 .39 RPM |
bodymap2_white_blood_cells | 721 .54 RPM |
bodymap2_lymph_node | 377 .22 RPM |
bodymap2_ovary | 193 .13 RPM |
bodymap2_kidney | 203 .27 RPM |
Species | Parental gene accession | Homology type | Retrogenes number | |
---|---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000006161 | ortholog_one2one | 1 retrogene | |
Bos taurus | ENSBTAG00000019910 | ortholog_one2one | 2 retrogenes | |
Canis familiaris | ENSCAFG00000007112 | ortholog_one2many | 1 retrogene | |
Choloepus hoffmanni | ENSCHOG00000003565 | ortholog_one2one | 5 retrogenes | |
Equus caballus | ENSECAG00000015053 | ortholog_one2one | 1 retrogene | |
Gorilla gorilla | ENSGGOG00000009019 | ortholog_one2one | 2 retrogenes | |
Loxodonta africana | ENSLAFG00000010757 | ortholog_one2one | 1 retrogene | |
Microcebus murinus | ENSMICG00000003968 | ortholog_one2one | 1 retrogene | |
Myotis lucifugus | ENSMLUG00000004807 | ortholog_one2many | 1 retrogene | |
Macaca mulatta | ENSMMUG00000017296 | ortholog_one2many | 1 retrogene | |
Mustela putorius furo | ENSMPUG00000010339 | ortholog_one2many | 5 retrogenes | |
Nomascus leucogenys | ENSNLEG00000001408 | ortholog_one2one | 2 retrogenes | |
Otolemur garnettii | ENSOGAG00000013462 | ortholog_one2one | 1 retrogene | |
Procavia capensis | ENSPCAG00000016432 | ortholog_one2one | 1 retrogene | |
Pongo abelii | ENSPPYG00000018612 | ortholog_one2one | 3 retrogenes | |
Pan troglodytes | ENSPTRG00000020277 | ortholog_one2one | 2 retrogenes | |
Tupaia belangeri | ENSTBEG00000013965 | ortholog_one2one | 1 retrogene |
# | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
---|---|---|---|---|---|---|
1. | retro_hsap_3971 | 84.75 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
2. | retro_hsap_4810 | 89.44 | 94.97 | Please wait, loading | Please wait, loading | Please wait, loading |