Parental gene:

SNF8, ENSG00000159210

Aliases:None
Description:SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:17028]
Organism:Human (Homo sapiens)
Coordinates:17:47006677..47022479(-)


>ENSG00000159210
ATGCACCGCCGCGGGGTGGGAGCTGGCGCCATCGCCAAGAAGAAACTTGCAGAGGCCAAGTATAAGGAGCGAGGGACGGT
CTTGGCTGAGGACCAGCTAGCCCAGATGTCAAAGCAGTTGGACATGTTCAAGACCAACCTGGAGGAATTTGCCAGCAAAC
ACAAGCAGGAGATCCGGAAGAATCCTGAGTTCCGTGTGCAGTTCCAGGACATGTGTGCAACCATTGGCGTGGATCCGCTG
GCCTCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGT
GTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAACAGGTGTTGAAGGGAAGGGGCA
AGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTGGCTTCGGCATC
ATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGGC
AGAGAAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGG
AACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTC
ACTGACCTCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 38 .82 RPM
bodymap2_adrenal 44 .01 RPM
bodymap2_brain 29 .35 RPM
bodymap2_breast 31 .73 RPM
bodymap2_colon 32 .35 RPM
bodymap2_heart 21 .65 RPM
bodymap2_kidney 48 .08 RPM
bodymap2_liver 20 .13 RPM
bodymap2_lung 22 .66 RPM
bodymap2_lymph_node 34 .92 RPM
bodymap2_ovary 36 .01 RPM
bodymap2_prostate 36 .41 RPM
bodymap2_skeletal_muscle 20 .35 RPM
bodymap2_testis 37 .56 RPM
bodymap2_thyroid 39 .77 RPM
bodymap2_white_blood_cells 26 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005062 ortholog_one2one 1 retrogene
retro_amel_164,
Canis familiaris ENSCAFG00000016893 ortholog_one2one 1 retrogene
retro_cfam_1488,
Choloepus hoffmanni ENSCHOG00000013760 ortholog_one2one 1 retrogene
retro_chof_1372,
Callithrix jacchus ENSCJAG00000007322 ortholog_one2one 2 retrogenes
retro_cjac_1175, retro_cjac_1922,
Echinops telfairi ENSETEG00000000758 ortholog_one2one 1 retrogene
retro_etel_709,
Felis catus ENSFCAG00000008944 ortholog_one2one 2 retrogenes
retro_fcat_1291, retro_fcat_574,
Gorilla gorilla ENSGGOG00000025290 ortholog_one2one 1 retrogene
retro_ggor_1816,
Macropus eugenii ENSMEUG00000016638 ortholog_one2one 1 retrogene
retro_meug_663,
Mustela putorius furo ENSMPUG00000015356 ortholog_one2one 1 retrogene
retro_mputfur_1425,
Mus musculus ENSMUSG00000006058 ortholog_one2one 1 retrogene
retro_mmus_1050,
Nomascus leucogenys ENSNLEG00000002743 ortholog_one2one 1 retrogene
retro_nleu_2520,
Oryctolagus cuniculus ENSOCUG00000009156 ortholog_one2one 2 retrogenes
retro_ocun_814, retro_ocun_996,
Pongo abelii ENSPPYG00000008911 ortholog_one2one 1 retrogene
retro_pabe_2161,
Tarsius syrichta ENSTSYG00000004576 ortholog_one2one 1 retrogene
retro_tsyr_843,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2394 83.61 93.80
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Download FASTA sequences of all ENSG00000159210 retrocopies