Parental gene:

Snf8, ENSMUSG00000006058

Aliases:Snf8, D11Moh34
Description:SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1343161]
Organism:Mouse (Mus musculus)
Coordinates:11:96034884..96047430(+)


>ENSMUSG00000006058
ATGCACCGGCGCGGGGTGGGAGCTGGCGCCATTGCCAAGAAGAAACTCGCAGAGGCCAAGTATAAGGAGCGAGGGACTGT
CCTGGCTGAGGACCAGCTGGCCCAGATGTCAAAACAGCTGGACATGTTCAAGACCAACCTAGAAGAATTTGCCAGCAAGC
ACAAGCAAGAGATCCGGAAGAATCCTGAGTTCCGAGTCCAGTTCCAAGACATGTGTGCAACCATTGGGGTGGATCCCCTG
GCCTCTGGAAAAGGCTTTTGGTCTGAGATGCTGGGCGTTGGGGACTTCTATTATGAACTGGGTGTCCAGATTATTGAAGT
GTGCCTGGCCCTCAAACATCGGAATGGAGGTCTGATAACTCTGGAGGAGCTACATCAGCAGGTGTTAAAAGGAAGGGGCA
AGTTTGCTCAGGATGTCAGCCAAGACGACCTGATCAGGGCCATCAAGAAGCTGAAAGCCCTGGGCACTGGATTCGGCATC
ATCCCTGTGGGAGGCACTTACCTCATCCAGTCTGTTCCCGCTGAGCTCAATATGGATCACACTGTTGTGCTGCAGCTGGC
CGAGAAAAACGGGTATGTGACTGTCAGTGAAATCAAAACCAGTCTTAAATGGGAGACGGAGCGAGCACGGCAAGTGCTGG
AACACCTGCTGAAGGAAGGACTGGCCTGGCTGGATCTGCAGGCTCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTTTTC
ACAGATCTCTACTCCCAGGAGATATCAGCTGAGGAGGCCAAAGAAGCCTTCCCTTGA

Library Parental gene expression (RPM)
SRP007412_brain 35 .04 RPM
SRP007412_cerebellum 25 .97 RPM
SRP007412_heart 16 .50 RPM
SRP007412_kidney 26 .66 RPM
SRP007412_liver 25 .29 RPM
SRP007412_testis 34 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005062 ortholog_one2one 1 retrogene
retro_amel_164,
Canis familiaris ENSCAFG00000016893 ortholog_one2one 1 retrogene
retro_cfam_1488,
Choloepus hoffmanni ENSCHOG00000013760 ortholog_one2one 1 retrogene
retro_chof_1372,
Callithrix jacchus ENSCJAG00000007322 ortholog_one2one 2 retrogenes
retro_cjac_1175, retro_cjac_1922,
Echinops telfairi ENSETEG00000000758 ortholog_one2one 1 retrogene
retro_etel_709,
Felis catus ENSFCAG00000008944 ortholog_one2one 2 retrogenes
retro_fcat_1291, retro_fcat_574,
Homo sapiens ENSG00000159210 ortholog_one2one 1 retrogene
retro_hsap_2394,
Gorilla gorilla ENSGGOG00000025290 ortholog_one2one 1 retrogene
retro_ggor_1816,
Macropus eugenii ENSMEUG00000016638 ortholog_one2one 1 retrogene
retro_meug_663,
Mustela putorius furo ENSMPUG00000015356 ortholog_one2one 1 retrogene
retro_mputfur_1425,
Nomascus leucogenys ENSNLEG00000002743 ortholog_one2one 1 retrogene
retro_nleu_2520,
Oryctolagus cuniculus ENSOCUG00000009156 ortholog_one2one 2 retrogenes
retro_ocun_814, retro_ocun_996,
Pongo abelii ENSPPYG00000008911 ortholog_one2one 1 retrogene
retro_pabe_2161,
Tarsius syrichta ENSTSYG00000004576 ortholog_one2one 1 retrogene
retro_tsyr_843,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1050 96.15 100.00
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Download FASTA sequences of all ENSMUSG00000006058 retrocopies