Parental gene:

RPL27A, ENSG00000166441

Aliases:RPL27A, L27A
Description:ribosomal protein L27a [Source:HGNC Symbol;Acc:10329]
Organism:Human (Homo sapiens)
Coordinates:11:8703957..8736306(+)


>ENSG00000166441
ATGCCATCCAGACTGAGGAAGACCCGGAAACTTAGGGGCCACGTGAGCCACGGCCACGGCCGCATAGGCAAGCACCGGAA
GCACCCCGGCGGCCGCGGTAATGCTGGTGGTCTGCATCACCACCGGATCAACTTCGACAAATACCACCCAGGCTACTTTG
GGAAAGTTGGTATGAAGCATTACCACTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGACAAATTGTGGACT
TTGGTCAGTGAACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTGCTCCCATCATTGATGTGGTGCGATCGGG
CTACTACAAAGTTCTGGGAAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAGGCCAAATTCTTCAGCAGAAGAGCTG
AGGAGAAGATTAAGAGTGTTGGGGGGGCCTGTGTCCTGGTGGCTTGA

Library Parental gene expression (RPM)
bodymap2_adipose 407 .04 RPM
bodymap2_adrenal 683 .19 RPM
bodymap2_brain 103 .14 RPM
bodymap2_breast 309 .93 RPM
bodymap2_colon 485 .08 RPM
bodymap2_heart 123 .73 RPM
bodymap2_kidney 179 .49 RPM
bodymap2_liver 187 .33 RPM
bodymap2_lung 563 .40 RPM
bodymap2_lymph_node 575 .42 RPM
bodymap2_ovary 534 .80 RPM
bodymap2_prostate 586 .75 RPM
bodymap2_skeletal_muscle 291 .64 RPM
bodymap2_testis 232 .16 RPM
bodymap2_thyroid 324 .56 RPM
bodymap2_white_blood_cells 719 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000001660 ortholog_one2many 2 retrogenes
retro_ggor_155, retro_ggor_1785,
Myotis lucifugus ENSMLUG00000016616 possible_ortholog 7 retrogenes
retro_mluc_113, retro_mluc_1253, retro_mluc_164, retro_mluc_2123, retro_mluc_2202, retro_mluc_47, retro_mluc_572,
Macaca mulatta ENSMMUG00000021828 ortholog_one2many 2 retrogenes
retro_mmul_207, retro_mmul_268,
Mus musculus ENSMUSG00000046364 possible_ortholog 1 retrogene
retro_mmus_40,
Pan troglodytes ENSPTRG00000003333 ortholog_one2many 1 retrogene
retro_ptro_33,
Rattus norvegicus ENSRNOG00000014214 possible_ortholog 10 retrogenes
retro_rnor_132, retro_rnor_193, retro_rnor_1996, retro_rnor_2466, retro_rnor_253, retro_rnor_261, retro_rnor_334, retro_rnor_370, retro_rnor_565, retro_rnor_606,
Tarsius syrichta ENSTSYG00000013207 ortholog_one2one 16 retrogenes
retro_tsyr_1103, retro_tsyr_155, retro_tsyr_1591, retro_tsyr_1607, retro_tsyr_1623, retro_tsyr_170, retro_tsyr_1725, retro_tsyr_187, retro_tsyr_204, retro_tsyr_283, retro_tsyr_498, retro_tsyr_50, retro_tsyr_550, retro_tsyr_608, retro_tsyr_612, retro_tsyr_716,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_239 73.48 89.19
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2. retro_hsap_1263 74.34 75.68
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3. retro_hsap_1908 74.23 87.96
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4. retro_hsap_2352 80.33 81.08
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5. retro_hsap_3335 82.00 100.00
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6. retro_hsap_3586 69.50 93.24
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7. retro_hsap_3682 97.30 100.00
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Download FASTA sequences of all ENSG00000166441 retrocopies