Parental gene:

MMU.2933, ENSMMUG00000021828

Aliases:None
Description:ribosomal protein L27a [Source:RefSeq peptide;Acc:NP_001180496]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:14:63261634..63264644(-)


>ENSMMUG00000021828
ATGCCATCCAGACTGAGGAAGACCCGGAAACTTCGGGGCCACGTGAGCCACGGCCACGGCCGCATAGGCAAGCACCGGAA
GCACCCCGGAGGCCGCGGTAATGCTGGTGGTCTGCATCACCACCGGATCAACTTCGACAAATACCACCCAGGCTACTTTG
GGAAAGTTGGTATGAGGCATTACCACTTAAAGAGGAACCAGAGCTTCTGTCCAACTGTCAACCTTGACAAATTGTGGACT
TTGGTCAGTGAGCAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTGCTCCCATCATTGATGTGGTGCGATCGGG
CTACTACAAAGTTCTGGGAAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAGGCCAAATTCTTCAGCAGAAGAGCTG
AGGAGAAGATTAAGGGTGTTGGGGGGGCCTGTGTCCTGGTGGCTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 168 .26 RPM
SRP007412_brain 65 .33 RPM
SRP007412_cerebellum 73 .87 RPM
SRP007412_heart 126 .49 RPM
SRP007412_kidney 130 .16 RPM
SRP007412_liver 198 .28 RPM
SRP007412_testis 59 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Ficedula albicollis ENSFALG00000000924 possible_ortholog 1 retrogene
retro_falb_20,
Homo sapiens ENSG00000166441 ortholog_one2many 7 retrogenes
retro_hsap_1263, retro_hsap_1908, retro_hsap_2352, retro_hsap_239, retro_hsap_3335, retro_hsap_3586, retro_hsap_3682,
Gorilla gorilla ENSGGOG00000001660 ortholog_many2many 2 retrogenes
retro_ggor_155, retro_ggor_1785,
Myotis lucifugus ENSMLUG00000016616 possible_ortholog 7 retrogenes
retro_mluc_113, retro_mluc_1253, retro_mluc_164, retro_mluc_2123, retro_mluc_2202, retro_mluc_47, retro_mluc_572,
Monodelphis domestica ENSMODG00000007480 possible_ortholog 1 retrogene
retro_mdom_575,
Mus musculus ENSMUSG00000046364 possible_ortholog 1 retrogene
retro_mmus_40,
Nomascus leucogenys ENSNLEG00000017535 ortholog_many2many 1 retrogene
retro_nleu_102,
Pan troglodytes ENSPTRG00000003333 ortholog_many2many 1 retrogene
retro_ptro_33,
Rattus norvegicus ENSRNOG00000014214 possible_ortholog 10 retrogenes
retro_rnor_132, retro_rnor_193, retro_rnor_1996, retro_rnor_2466, retro_rnor_253, retro_rnor_261, retro_rnor_334, retro_rnor_370, retro_rnor_565, retro_rnor_606,
Tupaia belangeri ENSTBEG00000000046 possible_ortholog 20 retrogenes
retro_tbel_1093, retro_tbel_1101, retro_tbel_1148, retro_tbel_1152, retro_tbel_1223, retro_tbel_1338, retro_tbel_1639, retro_tbel_2017, retro_tbel_2606, retro_tbel_2777, retro_tbel_298, retro_tbel_3111, retro_tbel_3496, retro_tbel_3881, retro_tbel_4566, retro_tbel_460, retro_tbel_544, retro_tbel_643, retro_tbel_925, retro_tbel_937,
Taeniopygia guttata ENSTGUG00000008355 possible_ortholog 1 retrogene
retro_tgut_18,
Tarsius syrichta ENSTSYG00000013207 ortholog_one2many 16 retrogenes
retro_tsyr_1103, retro_tsyr_155, retro_tsyr_1591, retro_tsyr_1607, retro_tsyr_1623, retro_tsyr_170, retro_tsyr_1725, retro_tsyr_187, retro_tsyr_204, retro_tsyr_283, retro_tsyr_498, retro_tsyr_50, retro_tsyr_550, retro_tsyr_608, retro_tsyr_612, retro_tsyr_716,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_207 97.97 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_268 98.65 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000021828 retrocopies