Parental gene:

TPI1, ENSGGOG00000002623

Aliases:None
Description:Triosephosphate isomerase [Source:UniProtKB/TrEMBL;Acc:G3QJI7]
Organism:Gorilla (Gorilla gorilla)
Coordinates:12:7067827..7070515(+)


>ENSGGOG00000002623
GTGGTTTGTGCTCCCCCTACTGCCTATATCGACTTCGCCCGGCAGAAGCTAGATCCCAAGATTGCTGTGGCTGCGCAGAA
CTGCTACAAAGTGACTAATGGGGCTTTTACTGGGGAGATCAGCCCTGGCATGATTAAAGACTGCGGAGCCACGTGGGTGG
TCCTGGGACACTCAGAGAGAAGGCATGTCTTTGGGGAGTCAGATGAGCTGATTGGGCAGAAAGTGGCCCATGCTCTGGCA
GAGGGACTCGGAGTAATCGCCTGCATTGGGGAGAAGCTAGATGAAAGGGAAGCTGGCATCACTGAGAAGGTTGTTTTCGA
GCAGACAAAGGTCATCGCAGATAACGTGAAGGACTGGAGCAAGGTCGTCCTGGCCTATGAGCCTGTGTGGGCCATTGGTA
CTGGCAAGACTGCAACACCCCAACAGGCCCAGGAAGTACACGAGAAGCTCCGAGGATGGCTGAAGTCCAACGTCTCTGAT
GCGGTGGCTCAGAGCACCCGTATCATTTATGGAGGCTCTGTGACTGGGGCAACCTGCAAGGAGCTGGCCAGCCAGCCTGA
CGTGGATGGCTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACATCATCAATGCCAAACAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 276 .84 RPM
SRP007412_cerebellum 144 .51 RPM
SRP007412_heart 128 .58 RPM
SRP007412_kidney 183 .80 RPM
SRP007412_liver 116 .56 RPM
SRP007412_testis 103 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007348 ortholog_one2many 2 retrogenes
retro_cjac_2190, retro_cjac_2370,
Homo sapiens ENSG00000111669 possible_ortholog 3 retrogenes
retro_hsap_3038, retro_hsap_3510, retro_hsap_3784,
Macropus eugenii ENSMEUG00000006977 ortholog_one2many 5 retrogenes
retro_meug_1348, retro_meug_1520, retro_meug_1934, retro_meug_267, retro_meug_512,
Myotis lucifugus ENSMLUG00000024989 ortholog_one2many 4 retrogenes
retro_mluc_1090, retro_mluc_1311, retro_mluc_1777, retro_mluc_1807,
Macaca mulatta ENSMMUG00000005194 ortholog_many2many 2 retrogenes
retro_mmul_1864, retro_mmul_250,
Mustela putorius furo ENSMPUG00000016774 ortholog_many2many 1 retrogene
retro_mputfur_136,
Mus musculus ENSMUSG00000023456 ortholog_one2many 4 retrogenes
retro_mmus_1180, retro_mmus_3260, retro_mmus_532, retro_mmus_558,
Nomascus leucogenys ENSNLEG00000004821 ortholog_one2many 2 retrogenes
retro_nleu_1120, retro_nleu_847,
Otolemur garnettii ENSOGAG00000031254 ortholog_many2many 1 retrogene
retro_ogar_109,
Pongo abelii ENSPPYG00000004207 ortholog_one2one 1 retrogene
retro_pabe_2902,
Pan troglodytes ENSPTRG00000004595 possible_ortholog 4 retrogenes
retro_ptro_160, retro_ptro_1999, retro_ptro_2382, retro_ptro_2565,
Rattus norvegicus ENSRNOG00000015290 ortholog_many2many 1 retrogene
retro_rnor_1304,
Rattus norvegicus ENSRNOG00000050669 ortholog_many2many 2 retrogenes
retro_rnor_2615, retro_rnor_787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_151 99.52 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000002623 retrocopies