Parental gene: | SEPHS1, ENSGGOG00000003806 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 10:13687178..13716989(-) |
>ENSGGOG00000003806
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTAGAATCTTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCATGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGACGACCCTTACATGATGGGCAGGATAGCGTGTGCCAATGT
CCTCAGTGACCTCTATGCAATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACATCTGTAACA
GGCGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTGGCTACCACTGTCTGCCAGCCCAATGAATTTATCAT
GCCGGTCTTTGGTTTTAGGATGGTCTTGGCAGGTTTACCTTCCACTGAGATCATAATCCCTCTGCATAGTTTTTTTAGTT
TACTGGAAGAGTGGCTCAAAATTGCGATTTCATTATTCCAATATGTCATCTCCCTGACAAGTAAGAAAGGTGTTTTTTCT
CAGAGTCGCCCCCTCTCTCTCCCAGCTGCAGGACTCATGCACACGTTCAATGCTCACGCTGCCACTGACATCACGGGCTT
CGGGATTTTGGGTCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCCCGGTGC
TGGCCAAGATGGCTGCGGTGAGCAAGGCCTGCGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCGGAGACTTCAGGC
GGCCTTCTCATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGAAGGCCA
CCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCCAGAATCATAGACAAACCCCGGATCATCGAGGTCG
CACCGCAAGTGGCCACTCAAAATGTGAATCCCACACCCGGGGCCACCTCTTAA
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTAGAATCTTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCATGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGACGACCCTTACATGATGGGCAGGATAGCGTGTGCCAATGT
CCTCAGTGACCTCTATGCAATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACATCTGTAACA
GGCGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTGGCTACCACTGTCTGCCAGCCCAATGAATTTATCAT
GCCGGTCTTTGGTTTTAGGATGGTCTTGGCAGGTTTACCTTCCACTGAGATCATAATCCCTCTGCATAGTTTTTTTAGTT
TACTGGAAGAGTGGCTCAAAATTGCGATTTCATTATTCCAATATGTCATCTCCCTGACAAGTAAGAAAGGTGTTTTTTCT
CAGAGTCGCCCCCTCTCTCTCCCAGCTGCAGGACTCATGCACACGTTCAATGCTCACGCTGCCACTGACATCACGGGCTT
CGGGATTTTGGGTCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCCCGGTGC
TGGCCAAGATGGCTGCGGTGAGCAAGGCCTGCGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCGGAGACTTCAGGC
GGCCTTCTCATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGAAGGCCA
CCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCCAGAATCATAGACAAACCCCGGATCATCGAGGTCG
CACCGCAAGTGGCCACTCAAAATGTGAATCCCACACCCGGGGCCACCTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 15 .20 RPM |
| SRP007412_cerebellum | 19 .11 RPM |
| SRP007412_heart | 6 .82 RPM |
| SRP007412_kidney | 33 .49 RPM |
| SRP007412_liver | 14 .24 RPM |
| SRP007412_testis | 19 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009494 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001971 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021233 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000016864 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012205 | possible_ortholog | 7 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002945 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018125 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_147 | 70.44 | 80.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2924 | 76.85 | 75.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000003806 retrocopies