Parental gene: | SEPHS1, ENSNLEG00000012205 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397271.1:12299066..12331257(+) |
>ENSNLEG00000012205
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTGGAATCTTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGACGACCCTTACATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGTGACCTCTATGCAATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCAGTAACG
GGTGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTCGCTACCACTGTCTGCCAGCCCAATGAATTTATCAT
GCCAGACAATGCAGTGCCAGGGGACGTGCTGGTGTTGACAAAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGT
GGCTGGATATTCCTGAGAAATGGAATAAGATTAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAGGAGGCG
ATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACGTTCAATGCCCACGCCGCCACTGACATCAC
GGGCTTCGGGATTTTGGGCCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCC
CGGTACTGGCCAAGATGGCTGCAGTGAGCAAGGCCTGCGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCGGAGACT
TCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGA
AGGCCACCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCGAGAATCATAGACAAACCCCGGATCATCG
AGGTTGCACCACAAGTGGCCACTCAAAACGTGAATCCCACACCCGGGGCCACCTCTTAA
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTGGAATCTTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGACGACCCTTACATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGTGACCTCTATGCAATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCAGTAACG
GGTGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTCGCTACCACTGTCTGCCAGCCCAATGAATTTATCAT
GCCAGACAATGCAGTGCCAGGGGACGTGCTGGTGTTGACAAAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGT
GGCTGGATATTCCTGAGAAATGGAATAAGATTAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAGGAGGCG
ATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACGTTCAATGCCCACGCCGCCACTGACATCAC
GGGCTTCGGGATTTTGGGCCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCC
CGGTACTGGCCAAGATGGCTGCAGTGAGCAAGGCCTGCGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCGGAGACT
TCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGA
AGGCCACCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCGAGAATCATAGACAAACCCCGGATCATCG
AGGTTGCACCACAAGTGGCCACTCAAAACGTGAATCCCACACCCGGGGCCACCTCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013555 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004743 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009494 | ortholog_many2many | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000014119 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000014281 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000003921 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000086475 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003806 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000004670 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012188 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001971 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021233 | ortholog_one2one | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000016864 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000948 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000026662 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007807 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000006587 | possible_ortholog | 3 retrogenes | |
| Procavia capensis | ENSPCAG00000015617 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002099 | possible_ortholog | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000002303 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002945 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018125 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011114 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_234 | 96.82 | 95.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_327 | 92.09 | 99.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_1868 | 96.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_2211 | 97.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_2668 | 80.05 | 94.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_nleu_2873 | 89.02 | 65.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_nleu_3004 | 97.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000012205 retrocopies