Parental gene:

Sephs1, ENSRNOG00000018125

Aliases:None
Description:selenide, water dikinase 1 [Source:RefSeq peptide;Acc:NP_001098100]
Organism:Rat (Rattus norvegicus)
Coordinates:17:78978378..79006698(-)


>ENSRNOG00000018125
ATGTCTACTCGGGAGTCCTTTAACCCGGAAACTTATGAATTGGACAAGAGCTTCCGGCTAACCAGGTTTACTGAACTGAA
AGGCACAGGCTGCAAAGTGCCCCAAGATGTCTTGCAGAAATTGCTGGAATCTTTACAAGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCGGTTATGCCACGACTTGGCATTGGGATGGATACTTGCGTCATTCCTCTGAGGCACGGTGGTCTC
TCCTTGGTTCAAACCACAGATTACATTTATCCTATCGTGGACGACCCTTACATGATGGGCAGGATAGCGTGTGCCAATGT
CCTCAGTGACCTCTATGCGATGGGTGTCACAGAATGTGACAATATGCTAATGCTCCTTGGAGTCAGTAATAAAATGACTG
ACCGGGAAAGGGATAAAGTGATGCCGCTAATTATACAGGGTTTTAAAGATGCGGCCGAGGAAGCGGGGACCTCTGTAACG
GGGGGCCAAACGGTATTGAACCCCTGGATTGTTCTGGGAGGAGTCGCCACAACTGTCTGCCAGCCCAATGAATTTATCAT
GCCAGACAACGCGGTGCCGGGGGACGTGCTGGTGCTGACCAAACCCCTGGGGACGCAGGTTGCAGTGGCTGTGCACCAGT
GGCTGGATATTCCTGAAAAATGGAATAAAATTAAGCTCGTGGTCACCCAAGAAGACGTAGAGCTGGCATACCAAGAGGCA
ATGGTGAACATGGCGCGGCTCAACAGGACAGCTGCAGGCCTCATGCACACGTTCAATGCTCATGCAGCCACTGATATCAC
AGGCTTCGGGATTCTGGGCCATGCACAGAACCTGGCCAAGCAACAGAGGAACGAGGTGTCGTTTGTGATTCACAATCTTC
CCGTGCTAGCCAAGATGGCCGCTGTGAGCAAAGCCTGCGGAAACATGTTCGGCCTAATGCATGGGACCTGCCCAGAGACG
TCAGGAGGCCTGCTAATCTGCCTACCGCGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGCGA
AGGCCACCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCCAGAATCATCGACAAACCTCGGATTATTG
AAGTCGCACCTCAAGTAGCCACGCAAAACGTGAATCCCACACCTGGTGCCACCTCCTAA

Library Parental gene expression (RPM)
SRP017611_brain 29 .77 RPM
SRP017611_kidney 80 .53 RPM
SRP017611_liver 38 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013555 possible_ortholog 1 retrogene
retro_amel_21,
Canis familiaris ENSCAFG00000004743 possible_ortholog 2 retrogenes
retro_cfam_1787, retro_cfam_250,
Callithrix jacchus ENSCJAG00000009494 ortholog_many2many 2 retrogenes
retro_cjac_166, retro_cjac_2219,
Dipodomys ordii ENSDORG00000014119 ortholog_one2one 1 retrogene
retro_dord_792,
Equus caballus ENSECAG00000014281 ortholog_one2many 1 retrogene
retro_ecab_77,
Felis catus ENSFCAG00000003921 possible_ortholog 1 retrogene
retro_fcat_96,
Homo sapiens ENSG00000086475 ortholog_one2one 3 retrogenes
retro_hsap_2196, retro_hsap_3860, retro_hsap_4705,
Gorilla gorilla ENSGGOG00000003806 possible_ortholog 2 retrogenes
retro_ggor_147, retro_ggor_2924,
Loxodonta africana ENSLAFG00000004670 possible_ortholog 1 retrogene
retro_lafr_125,
Macropus eugenii ENSMEUG00000012188 possible_ortholog 1 retrogene
retro_meug_245,
Myotis lucifugus ENSMLUG00000001971 possible_ortholog 2 retrogenes
retro_mluc_2350, retro_mluc_728,
Macaca mulatta ENSMMUG00000021233 ortholog_one2one 4 retrogenes
retro_mmul_1607, retro_mmul_2495, retro_mmul_2647, retro_mmul_922,
Monodelphis domestica ENSMODG00000016864 possible_ortholog 1 retrogene
retro_mdom_86,
Mustela putorius furo ENSMPUG00000000948 possible_ortholog 1 retrogene
retro_mputfur_20,
Mus musculus ENSMUSG00000026662 ortholog_one2one 1 retrogene
retro_mmus_248,
Nomascus leucogenys ENSNLEG00000012205 ortholog_one2one 7 retrogenes
retro_nleu_1868, retro_nleu_2211, retro_nleu_234, retro_nleu_2668, retro_nleu_2873, retro_nleu_3004, retro_nleu_327,
Otolemur garnettii ENSOGAG00000007807 ortholog_one2one 1 retrogene
retro_ogar_3026,
Ochotona princeps ENSOPRG00000006587 possible_ortholog 3 retrogenes
retro_opri_271, retro_opri_655, retro_opri_670,
Procavia capensis ENSPCAG00000015617 possible_ortholog 1 retrogene
retro_pcap_341,
Pongo abelii ENSPPYG00000002099 possible_ortholog 6 retrogenes
retro_pabe_1324, retro_pabe_1378, retro_pabe_2074, retro_pabe_2620, retro_pabe_3047, retro_pabe_3652,
Pan troglodytes ENSPTRG00000002303 ortholog_one2one 3 retrogenes
retro_ptro_1135, retro_ptro_1669, retro_ptro_3126,
Pteropus vampyrus ENSPVAG00000002945 possible_ortholog 2 retrogenes
retro_pvam_115, retro_pvam_566,
Tursiops truncatus ENSTTRG00000011114 possible_ortholog 1 retrogene
retro_ttru_649,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_59 80.37 81.89
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Download FASTA sequences of all ENSRNOG00000018125 retrocopies