Parental gene:

KARS, ENSGGOG00000005515

Aliases:None
Description:Lysine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:G3QRY3]
Organism:Gorilla (Gorilla gorilla)
Coordinates:16:66014592..66032145(-)


>ENSGGOG00000005515
ATGTTGACGCAAGCTGCTGTAAGGCTTGTTAGGGGGTCCCTGCGCAAAACCTCCTGGGCAGAGTGGGGTCACAGGGAACT
GCGACTGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGAAGTGAGCTGAAGAGAC
GCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAACAGCTAAGCCAAGCCACC
GCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACTACAAAAT
CCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCA
CTGACTTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATC
CATGCCAAAAGAGCTTCTGGGGGAAAGCTTATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAA
TTCCAGAAATTATAAATCAGAAGAAGAATTTATTCATGTTAACAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGG
GGAATCCTGGTAAAACCAAGAAGGGTGAGCTGAGCATCATTCCGTATGAGATCACCCTGCTGTCTCCCTGTTTGCATATG
TTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGTATCGCCAGAGATACTTGGACTTGATCCTGAATGACTT
TGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTCTTGGATGAGCTGGGATTCCTAGAGA
TTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATCACAATGAGCTGGACATG
AACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATGAAATTGG
ACGCCAGTTCCGGAATGAGGGGATTGATTTGACACACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAG
ACTATCACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACC
TACCACCCAGACGGCCCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGA
GCTTGAGAAAGCCCTGGGGATGAAGCTGCCAGAAACGAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATA
TCTGTGTGGCAAAAGCTGTTGAATGCCCTCCACCTCGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTG
GAAGTGACTTGCATCAGTCCTACATTCATCTGTGATCACCCACAGATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAA
AGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCAATGCCTACACTGAGCTGAATGATCCCA
TGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCATGTTCATAGATGAAAAC
TTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGTTTCTCAC
GGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTG
ATACACTGGAAAGCACAACAGTTGGCACTTCTGTCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 72 .46 RPM
SRP007412_cerebellum 58 .59 RPM
SRP007412_heart 44 .28 RPM
SRP007412_kidney 95 .76 RPM
SRP007412_liver 57 .64 RPM
SRP007412_testis 208 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013447 ortholog_one2one 1 retrogene
retro_chof_2324,
Callithrix jacchus ENSCJAG00000014213 ortholog_one2one 2 retrogenes
retro_cjac_4104, retro_cjac_608,
Homo sapiens ENSG00000065427 ortholog_one2one 1 retrogene
retro_hsap_1191,
Mus musculus ENSMUSG00000031948 ortholog_one2one 8 retrogenes
retro_mmus_3536, retro_mmus_3537, retro_mmus_3538, retro_mmus_3539, retro_mmus_3540, retro_mmus_3541, retro_mmus_3542, retro_mmus_3543,
Nomascus leucogenys ENSNLEG00000013072 ortholog_one2one 1 retrogene
retro_nleu_2080,
Pongo abelii ENSPPYG00000007567 ortholog_one2one 1 retrogene
retro_pabe_992,
Pan troglodytes ENSPTRG00000008364 ortholog_one2one 1 retrogene
retro_ptro_3036,
Pteropus vampyrus ENSPVAG00000006746 ortholog_one2one 2 retrogenes
retro_pvam_1301, retro_pvam_723,
Sorex araneus ENSSARG00000011493 ortholog_one2one 1 retrogene
retro_sara_415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_930 77.29 83.20
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Download FASTA sequences of all ENSGGOG00000005515 retrocopies