Parental gene:

KARS, ENSPVAG00000006746

Aliases:None
Description:lysyl-tRNA synthetase [Source:HGNC Symbol;Acc:6215]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_4335:40362..51260(+)


>ENSPVAG00000006746
ATGTTGACGCAAGCTGCTGTAAGGCTTGTTAGGGAGTCCCTGCGCCAAACCTGGGCACAGTTGGGGCAGAGGGAGCTGCA
GCTGTGGCAACTTGCTCCTTTCAGAACGCTTCACAAGGACAAGCCACTTTCTAATAAAAGAAGTGAGCTGAAGAGACGCC
TGAAAGCTGAGAAGAAGGTGGCCGAGAAGGAGGCTAAGCAGAAGGAGCTCAGTGAGAAACAACTAAGCCAGGCCAATGCT
GCTGCCACCAACCACACCAATGACAATGATGTGGGTGCAGAGGAGGAGAGCCTGGACCCAAACCAATACTACAAGATCCG
CAGCCAAGCAGTCCACCAACTCAAGATCAGTGGGGAAGACCCGTACCCACACAAGTTCCATGTAGATGTCTCACTTACTC
ACTTCATCCAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGAGTGACATCACCTTAAAGGTAGCAGGTAGGATCCAT
GCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTCTATGACCTTCGAGGAGAGGGCGTTAAGTTACAAGTCATGGCCAATTC
GAGGAATTATAAATCAGAAGAAGAATTTATTCGTATCAATAACAAATTACGTCGGGGAGACATAATTGGAGTTCAGGGAA
ATCCTGGGAAAACTAAGAAGGGTGAGCTGAGCATCATTCCTCATGAGATCACACTGTTGTCTCCTTGCTTACATATGTTA
CCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACACGATATCGTCAAAGATACTTGGACTTGATCTTGAATGACTTCGT
GAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTCTTGGATGAGTTGGGATTCTTAGAGATTG
AAACTCCCATGATGAACATCATCCCAGGGGGAGCTGTGGCCAAGCCTTTTATCACCTACCACAATGAGCTGGACATGAAT
TTATATATGAGAATTGCTCCAGAACTCTACCATAAGATGCTGGTGGTTGGTGGCATTGACCGAGTTTATGAAATTGGACG
CCAGTTCCGGAATGAAGGAATCGATTTGACTCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTACGCAGACT
ATCACGATCTCATGGAAATCACGGAGAAGATGATTTCAGGGATGGTGAAGCACATTACAGGCAGTTACAAGGTCACTTAC
CATCCAGATGGTCCAGAGGGCCAAGCCTATGAGATTGACTTCACTCCACCCTTCCGGAGAATCAACATGGTAGAAGAGCT
TGAGAAATCTCTGGGGGTGAAGCTTCCAGACACTAAACTCTTCGAAAGTGAAGAAACTCGCAAAATCCTTGATGATATCT
GTGTGGCCAAAGCTGTTGAATGCCCTCCGCCTAGGACCACAGCCAGGCTCCTTGATAAGCTTGTTGGGGAGTTCCTGGAA
GTGACATGCATCAATCCTACATTCATCTGTGATCACCCACAGATAATGAGCCCTTTGGCCAAATGGCACCGTTCTAAAGA
AGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAGGAAATATGCAATGCCTACACCGAGCTGAACGACCCCATGC
GGCAGCGGCAGCTTTTCGAAGAACAGGCCAAGGCCAAGGCTGCTGGCGATGATGAGGCCATGTTCATAGATGAAAACTTC
TGCACCGCCCTGGAATACGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATCGACCGAGTCACCATGTTCCTCACAGA
CTCCAATAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCAGAAGACAAGAAAGAAAATGTAGCAACTGCTGATA
CTTTGGAAAGCACAACAGCTGGCACTTCTGCCTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013447 ortholog_one2one 1 retrogene
retro_chof_2324,
Callithrix jacchus ENSCJAG00000014213 ortholog_one2one 2 retrogenes
retro_cjac_4104, retro_cjac_608,
Homo sapiens ENSG00000065427 ortholog_one2one 1 retrogene
retro_hsap_1191,
Gorilla gorilla ENSGGOG00000005515 ortholog_one2one 1 retrogene
retro_ggor_930,
Mus musculus ENSMUSG00000031948 ortholog_one2one 8 retrogenes
retro_mmus_3536, retro_mmus_3537, retro_mmus_3538, retro_mmus_3539, retro_mmus_3540, retro_mmus_3541, retro_mmus_3542, retro_mmus_3543,
Nomascus leucogenys ENSNLEG00000013072 ortholog_one2one 1 retrogene
retro_nleu_2080,
Pongo abelii ENSPPYG00000007567 ortholog_one2one 1 retrogene
retro_pabe_992,
Pan troglodytes ENSPTRG00000008364 ortholog_one2one 1 retrogene
retro_ptro_3036,
Sorex araneus ENSSARG00000011493 ortholog_one2one 1 retrogene
retro_sara_415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_723 72.27 56.25
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2. retro_pvam_1301 74.64 66.03
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Download FASTA sequences of all ENSPVAG00000006746 retrocopies