Parental gene: | Kars, ENSMUSG00000031948 |
| Aliases: | Kars, AA589550, AL024334, AL033315, AL033367, D8Ertd698e, D8Wsu108e, LysRS, mKIAA0070 |
| Description: | lysyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1934754] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:111993439..112011323(-) |
>ENSMUSG00000031948
ATGTTGATGCAAGCTGCTGTCAGGCTTGTTAGGGGGGCCCTGCGCCAAACCTCATGGGCAGAATGGGGTCAGAGGGAACT
TCGACTGGGCCACCTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGC
GTCTGAAAGCTGAGAAGAAACTGGCAGAGAAGGAGGCCAAGCAGAAAGAGCTGAGTGAGAAACAGCTAAACCAGACTGCT
TCCGCTCCCAACCACACGGCTGACAATGGCGTGGGTGCTGAGGAGGAGACTCTGGACCCAAATCAATACTACAAGATCCG
AAGTCAAGCCGTCCAGCAGCTGAAGGTCACTGGGGAGGATCCGTACCCACACAAGTTCCACGTGGACATCTCACTCACTC
AGTTCATCCAAGAATATAGTCACCTGCAGCCTGGGGACCACCTGACTGATGTCACCCTCAAAGTGGCAGGCCGCATCCAC
GCCAAGAGGGCCTCTGGAGGGAAGCTCATCTTCTATGACCTGCGAGGAGAGGGGGTCAAGTTACAAGTCATGGCCAACTC
CAGGAATTACAAATCAGAGGAGGAATTTGTTCATATCAATAACAAACTGCGCCGGGGAGACATAATTGGAGTTGAGGGCA
ATCCCGGGAAAACCAAGAAGGGCGAGCTGAGCATCATCCCCCAGGAGATCACGCTGCTGTCCCCCTGCTTGCACATGCTG
CCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACACGGTATCGTCAAAGATACTTGGACTTGATCCTGAACGACTTTGT
GAGGCAGAAATTTATCGTCCGCTCTAAGATCATCACATACATAAGAAGTTTCTTGGATGAGCTGGGCTTCCTAGAGATCG
AAACTCCCATGATGAACATCATTCCCGGGGGAGCTGTGGCCAAGCCTTTCATCACCTATCACAATGAGCTGGACATGAAC
TTGTATATGAGAATTGCTCCAGAACTCTACCACAAGATGCTGGTGGTTGGTGGCATTGACCGGGTTTATGAAATTGGGCG
CCAGTTCCGGAACGAAGGGATTGATTTGACTCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACT
ATCATGACCTCATGGAGATCACAGAGAAGATGCTGTCAGGGATGGTGAAGAGCATTACAGGCAGTTACAAGATCACCTAC
CACCCAGATGGGCCGGAAGGCCAAGCCTACGAGGTCGACTTCACCCCACCCTTCCGAAGAATCAGCATGGTAGAAGAGCT
TGAGAAAGCCCTAGGTGTGAAGCTGCCAGAAACCAGTCTCTTTGAAACTGAAGAAACTCGGAAAATTCTTGATGATATTT
GTGTTGCAAAAGCTGTTGAATGCCCCCCACCTCGGACCACAGCCAGGCTCCTTGATAAGCTCGTTGGCGAGTTCCTCGAA
GTCACATGCATCAGCCCTACCTTCATCTGTGATCACCCACAGATCATGAGTCCTTTGGCCAAATGGCACCGCTCCAAAGA
GGGTCTCACGGAGCGCTTTGAGCTGTTTGTCATGAAGAAGGAGATATGCAATGCCTATACTGAGCTGAATGACCCCGTGC
GGCAGAGGCAGCTGTTTGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATGACGAGGCCATGTTCATAGACGAGAACTTC
TGTACTGCCCTGGAATACGGGCTGCCTCCCACAGCGGGCTGGGGCATGGGCATTGATCGGCTCACCATGTTTCTCACCGA
TTCCAACAATATCAAGGAAGTACTTCTGTTTCCTGCCATGAAGCCAGAGGACAAGAAGGAAACTGCAGCGACCACTGAAA
CCCCAGAGAGCACAGAGGCCAGCCCCTCTGTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 57 .24 RPM |
| SRP007412_cerebellum | 70 .00 RPM |
| SRP007412_heart | 104 .38 RPM |
| SRP007412_kidney | 86 .62 RPM |
| SRP007412_liver | 64 .45 RPM |
| SRP007412_testis | 100 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013447 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014213 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000065427 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005515 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013072 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007567 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008364 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000006746 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000011493 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_3536 | 75.38 | 83.17 | Please wait, loading  |
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| 2. | retro_mmus_3537 | 75.57 | 83.17 | Please wait, loading |
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| 3. | retro_mmus_3538 | 75.76 | 83.17 | Please wait, loading |
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| 4. | retro_mmus_3539 | 74.43 | 83.17 | Please wait, loading |
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| 5. | retro_mmus_3540 | 75.57 | 87.23 | Please wait, loading |
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| 6. | retro_mmus_3541 | 75.57 | 87.23 | Please wait, loading |
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| 7. | retro_mmus_3542 | 75.14 | 83.17 | Please wait, loading |
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| 8. | retro_mmus_3543 | 74.95 | 83.17 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000031948 retrocopies