Parental gene: | ENSG00000234125, ENSGGOG00000013557 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 11:59339342..59351312(-) |
>ENSGGOG00000013557
ATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTTACTTGAA
GACGAGGACTTTTCTGGTGGGCGAACGAGTGGCGCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTCGCTCACCTGCCCA
AGAGTACCTTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAATGAGGACACACTCTCTGTGGCACTGCCATATTTCTGG
GAGCACTTTGATAAGGACGGCTGGTCCCTGTGGTACTCAGAGTATCGCTTCCCTGAAGAACTCACTCAGACCTTCATGAG
CTGCAATCTCATCACTGGAATGTTCCAGCGACTGGACAAGCTGAGGAAGAATGCCTTCGCCAGTGTCATCCTTTTTGGAA
CCAACAATAGCAGCTCCATTTCTGGAGTCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAG
GTGGACTACGAGTCATACACAAGGAAACTGGATCCTGGCAGCGAGGAGACCCAGACGCTGGTTCGAGAGTACTTTTCCTG
GGAGGGGGCCTTCCAGCATGTGGGCAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGA
ATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTTACTTGAA
GACGAGGACTTTTCTGGTGGGCGAACGAGTGGCGCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTCGCTCACCTGCCCA
AGAGTACCTTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAATGAGGACACACTCTCTGTGGCACTGCCATATTTCTGG
GAGCACTTTGATAAGGACGGCTGGTCCCTGTGGTACTCAGAGTATCGCTTCCCTGAAGAACTCACTCAGACCTTCATGAG
CTGCAATCTCATCACTGGAATGTTCCAGCGACTGGACAAGCTGAGGAAGAATGCCTTCGCCAGTGTCATCCTTTTTGGAA
CCAACAATAGCAGCTCCATTTCTGGAGTCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAG
GTGGACTACGAGTCATACACAAGGAAACTGGATCCTGGCAGCGAGGAGACCCAGACGCTGGTTCGAGAGTACTTTTCCTG
GGAGGGGGCCTTCCAGCATGTGGGCAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 186 .35 RPM |
| SRP007412_cerebellum | 209 .48 RPM |
| SRP007412_heart | 245 .22 RPM |
| SRP007412_kidney | 553 .39 RPM |
| SRP007412_liver | 308 .31 RPM |
| SRP007412_testis | 350 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015834 | possible_ortholog | 6 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000001231 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000014700 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003339 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006598 | ortholog_one2one | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000007691 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000071644 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020075 | ortholog_one2one | 8 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000002851 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_243 | 57.14 | 51.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1935 | 72.38 | 50.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1936 | 79.52 | 57.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_1991 | 82.22 | 64.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_1992 | 71.43 | 57.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ggor_2064 | 80.71 | 96.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ggor_2065 | 79.88 | 81.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ggor_2214 | 78.99 | 65.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ggor_2542 | 82.67 | 72.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ggor_2633 | 98.22 | 81.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ggor_2946 | 80.22 | 62.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_ggor_2947 | 91.18 | 81.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000013557 retrocopies