Parental gene:

ENSG00000234125, ENSGGOG00000013557

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:11:59339342..59351312(-)


>ENSGGOG00000013557
ATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTTACTTGAA
GACGAGGACTTTTCTGGTGGGCGAACGAGTGGCGCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTCGCTCACCTGCCCA
AGAGTACCTTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAATGAGGACACACTCTCTGTGGCACTGCCATATTTCTGG
GAGCACTTTGATAAGGACGGCTGGTCCCTGTGGTACTCAGAGTATCGCTTCCCTGAAGAACTCACTCAGACCTTCATGAG
CTGCAATCTCATCACTGGAATGTTCCAGCGACTGGACAAGCTGAGGAAGAATGCCTTCGCCAGTGTCATCCTTTTTGGAA
CCAACAATAGCAGCTCCATTTCTGGAGTCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAG
GTGGACTACGAGTCATACACAAGGAAACTGGATCCTGGCAGCGAGGAGACCCAGACGCTGGTTCGAGAGTACTTTTCCTG
GGAGGGGGCCTTCCAGCATGTGGGCAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 186 .35 RPM
SRP007412_cerebellum 209 .48 RPM
SRP007412_heart 245 .22 RPM
SRP007412_kidney 553 .39 RPM
SRP007412_liver 308 .31 RPM
SRP007412_testis 350 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015834 possible_ortholog 6 retrogenes
retro_cfam_1241, retro_cfam_1398, retro_cfam_1862, retro_cfam_478, retro_cfam_638, retro_cfam_653,
Erinaceus europaeus ENSEEUG00000001231 ortholog_one2one 1 retrogene
retro_eeur_575,
Latimeria chalumnae ENSLACG00000014700 ortholog_one2one 1 retrogene
retro_lcha_82,
Loxodonta africana ENSLAFG00000003339 ortholog_one2one 1 retrogene
retro_lafr_381,
Macaca mulatta ENSMMUG00000006598 ortholog_one2one 5 retrogenes
retro_mmul_1447, retro_mmul_1905, retro_mmul_2528, retro_mmul_736, retro_mmul_802,
Monodelphis domestica ENSMODG00000007691 possible_ortholog 1 retrogene
retro_mdom_68,
Mus musculus ENSMUSG00000071644 ortholog_one2one 7 retrogenes
retro_mmus_1447, retro_mmus_1839, retro_mmus_2350, retro_mmus_2765, retro_mmus_3080, retro_mmus_425, retro_mmus_989,
Rattus norvegicus ENSRNOG00000020075 ortholog_one2one 8 retrogenes
retro_rnor_1312, retro_rnor_2126, retro_rnor_2235, retro_rnor_2269, retro_rnor_2468, retro_rnor_2617, retro_rnor_2928, retro_rnor_979,
Ictidomys tridecemlineatus ENSSTOG00000002851 ortholog_one2one 2 retrogenes
retro_itri_852, retro_itri_886,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_243 57.14 51.22
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2. retro_ggor_1935 72.38 50.73
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3. retro_ggor_1936 79.52 57.24
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4. retro_ggor_1991 82.22 64.88
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5. retro_ggor_1992 71.43 57.24
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6. retro_ggor_2064 80.71 96.55
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7. retro_ggor_2065 79.88 81.46
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8. retro_ggor_2214 78.99 65.85
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9. retro_ggor_2542 82.67 72.20
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10. retro_ggor_2633 98.22 81.95
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11. retro_ggor_2946 80.22 62.76
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12. retro_ggor_2947 91.18 81.95
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Download FASTA sequences of all ENSGGOG00000013557 retrocopies