Parental gene: | SPCS2, ENSGGOG00000014500 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 11:71970468..71999222(+) |
>ENSGGOG00000014500
ATGGCGGCGGCAGCTGTACAGGGCGGGAGAAGCGGTGGTAGCGGAGGCTGTAGTGGGGCTGGTGGTGCTTCCAACTGCGG
GACAGGAAGTGGCCGTAGCGGCTTGTTGGATAAGTGGAAGATAGATGATAAGCCTGTAAAAATTGACAAGTGGGATGGAT
CAGCTGTGAAAAACTCTTTGGATGATTCTGCCAAAAAGGTACTTCTGGAAAAATACAAATATGTGGAGAATTTTGGTCTA
ATTGATGGTCGCCTCACCATCTGTACAATCTCCTGTTTCTTTGCCATAGTGGCTTTGATTTGGGATTATATGCACCCCTT
TCCAGAGTCCAAACCCGTTTTGGCTTTGTGTGTCATATCATCCTATTTTGTGATGATGGGGATTCTGACCATTTATACCT
CATATAAGGAGAAGAGCATCTTTCTCGTGGCCCACAGGAAAGATCCTACAGGAATGGATCCTGATGATATTTGGCAGCTG
TCCTCCAGTCTTAAAAGGTTTGATGACAAATACACCTTGAAGCTGACCTTCATCAGTGGGAGAACAAAGCAGCAGCGGGA
AGCCGAGTTCACAAAGTCCATTGCTAAGTTTTTTGACCACAGTGGGACACTGGTCATGGATGCATATGAGCCTGAAATAT
CCAGGCTCCATGACAGTCTTGCCATAGAAAGAAAAATAAAGTAG
ATGGCGGCGGCAGCTGTACAGGGCGGGAGAAGCGGTGGTAGCGGAGGCTGTAGTGGGGCTGGTGGTGCTTCCAACTGCGG
GACAGGAAGTGGCCGTAGCGGCTTGTTGGATAAGTGGAAGATAGATGATAAGCCTGTAAAAATTGACAAGTGGGATGGAT
CAGCTGTGAAAAACTCTTTGGATGATTCTGCCAAAAAGGTACTTCTGGAAAAATACAAATATGTGGAGAATTTTGGTCTA
ATTGATGGTCGCCTCACCATCTGTACAATCTCCTGTTTCTTTGCCATAGTGGCTTTGATTTGGGATTATATGCACCCCTT
TCCAGAGTCCAAACCCGTTTTGGCTTTGTGTGTCATATCATCCTATTTTGTGATGATGGGGATTCTGACCATTTATACCT
CATATAAGGAGAAGAGCATCTTTCTCGTGGCCCACAGGAAAGATCCTACAGGAATGGATCCTGATGATATTTGGCAGCTG
TCCTCCAGTCTTAAAAGGTTTGATGACAAATACACCTTGAAGCTGACCTTCATCAGTGGGAGAACAAAGCAGCAGCGGGA
AGCCGAGTTCACAAAGTCCATTGCTAAGTTTTTTGACCACAGTGGGACACTGGTCATGGATGCATATGAGCCTGAAATAT
CCAGGCTCCATGACAGTCTTGCCATAGAAAGAAAAATAAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 22 .87 RPM |
| SRP007412_cerebellum | 14 .26 RPM |
| SRP007412_heart | 7 .50 RPM |
| SRP007412_kidney | 9 .85 RPM |
| SRP007412_liver | 9 .18 RPM |
| SRP007412_testis | 20 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017127 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000002974 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015576 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000007273 | ortholog_one2many | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000009679 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000118363 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000011153 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000010685 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007130 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000035227 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016949 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015621 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000014459 | ortholog_many2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003682 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000004073 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018164 | ortholog_one2many | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000005389 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000014850 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012647 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000005830 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_372 | 98.68 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_610 | 66.67 | 56.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1141 | 90.57 | 93.39 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000014500 retrocopies