Parental gene: | COX5A, ENSGGOG00000024426 |
| Aliases: | None |
| Description: | Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/TrEMBL;Acc:G3S175] |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 15:54543039..54560810(-) |
>ENSGGOG00000024426
ATGCTGGGCGCCGCTCTCCGCCGCTGCGCTGTGGCCGCAACCACCCGGGCCGGCCCTCGAGGCCTCCTGCACTCCGCCCG
GACCCCCGGCCCCGCCGCGGCTATCCAGTCAGTTCGCTGCTATTCCCATGGGTCACAGGAGACAGATGAGGAGTTTGATG
CTCGCTGGGTAACATACTTCAACAAGCCAGATATAGATGCCTGGGAATTGCGTAAAGGGATAAACACACTTGTTACCTAT
GATATGGTTCCAGAGCCCAAAATCATTGATGCTGCTTTGCGGGCATGCAGACGGTTAAATGATTTTGCTAGTACAGTTCG
TATCCTAGAGGCTGTTAAGGACAAAGCAGGACCTCATAAGGAAATCTACCCCTATGTCATCCAGGAACTTAGACCAACTT
TAAATGAACTGGGAATCTCCACTCCGGAGGAACTGGGCCTTGACAAAGTGTAA
ATGCTGGGCGCCGCTCTCCGCCGCTGCGCTGTGGCCGCAACCACCCGGGCCGGCCCTCGAGGCCTCCTGCACTCCGCCCG
GACCCCCGGCCCCGCCGCGGCTATCCAGTCAGTTCGCTGCTATTCCCATGGGTCACAGGAGACAGATGAGGAGTTTGATG
CTCGCTGGGTAACATACTTCAACAAGCCAGATATAGATGCCTGGGAATTGCGTAAAGGGATAAACACACTTGTTACCTAT
GATATGGTTCCAGAGCCCAAAATCATTGATGCTGCTTTGCGGGCATGCAGACGGTTAAATGATTTTGCTAGTACAGTTCG
TATCCTAGAGGCTGTTAAGGACAAAGCAGGACCTCATAAGGAAATCTACCCCTATGTCATCCAGGAACTTAGACCAACTT
TAAATGAACTGGGAATCTCCACTCCGGAGGAACTGGGCCTTGACAAAGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 50 .40 RPM |
| SRP007412_cerebellum | 26 .12 RPM |
| SRP007412_heart | 100 .81 RPM |
| SRP007412_kidney | 76 .18 RPM |
| SRP007412_liver | 34 .87 RPM |
| SRP007412_testis | 52 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008643 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000017267 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000017977 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000006108 | ortholog_one2one | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015613 | ortholog_one2many | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000024832 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000010587 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000178741 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000006266 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013942 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013702 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011677 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000028168 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017314 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000000088 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014708 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005611 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000006652 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000012957 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018816 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015941 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000008004 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_817 | 64.80 | 82.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1041 | 82.35 | 89.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1096 | 77.85 | 98.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000024426 retrocopies