RetrogeneDB ID: | retro_meug_1280 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold350223:1152..1474(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COX5A | ||
Ensembl ID: | ENSMEUG00000013942 | ||
Aliases: | None | ||
Description: | cytochrome c oxidase subunit Va [Source:HGNC Symbol;Acc:2267] |
Percent Identity: | 68.18 % |
Parental protein coverage: | 93.91 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | YSHGSHETDEEFDARWVTYFSKPDLDAWELRKGMNTLVGYDLVP-EPKIIDAALRACRRLDDFASAVRIL |
Y...SH..DEEF...WVTYFSKPDLDA.EL.KGMNTL.G.DL.P.E.KII.A.LRACR.LDDF.SAV.IL | |
Retrocopy | YFYESH--DEEFNTHWVTYFSKPDLDA*EL*KGMNTLFGCDLLP>ETKIIRAVLRACRQLDDFVSAVQIL |
Parental | EVVKDKAGPHK-IYPXXXXXXXXTLDELGISTPEELGLDK |
..VKDKAG.HK.IY.........TLDELGI.TPEEL.LDK | |
Retrocopy | KAVKDKAGAHK*IYSYVIQELRPTLDELGIHTPEELDLDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |