RetrogeneDB ID: | retro_ogar_2585 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873636.1:4693920..4694367(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000024980 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COX5A | ||
Ensembl ID: | ENSOGAG00000005611 | ||
Aliases: | None | ||
Description: | cytochrome c oxidase subunit Va [Source:HGNC Symbol;Acc:2267] |
Percent Identity: | 80. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MLGTALRRCAVAAASRAGPRGLLHPTPVPGPTAAIQSIRCYSHGSHETDEEFDARWVTYFNKPDIDAWEL |
.LGTAL...AV..A...GPRGL.HP.PV..PTAAIQ.IRCYSHGSHETDEE..A.WVTYFNKPDIDAWEL | |
Retrocopy | LLGTALSG-AVDTAAGPGPRGLRHPAPVHVPTAAIQAIRCYSHGSHETDEELHALWVTYFNKPDIDAWEL |
Parental | RKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGIS |
RKGMNT.VGYDLVPEP.IIDAA..ACR..NDF.SAVRIL.VVKDKA..H..IYPYVI.ELRPTLNELGIS | |
Retrocopy | RKGMNTPVGYDLVPEPQIIDAAFQACRTFNDFTSAVRILAVVKDKARSHYKIYPYVIRELRPTLNELGIS |
Parental | TPEELGLDKV |
TPEELGLDKV | |
Retrocopy | TPEELGLDKV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |