Parental gene: | YY1, ENSGGOG00000026332 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 14:82200531..82238808(+) |
>ENSGGOG00000026332
ATGGCCTCGGGCGACACCCTCTACATCGCCACGGACGGCTCGGAGATGCCGGCCGAGATCGTGGAGCTGCACGAGATCGA
GGTGGAGACCATCCCGGTGGAGACCATCGAGACCACAGTGGTGGGCGAAGAGGAGGAGGAGGACGACGACGACGAGGACG
GCGGCGGTGGCGACCACGGCGGCGGGGGCGGCCACGGGCACGCCGGCCACCACCACCACCACCATCACCACCACCACCAC
CCGCCCATGATCGCTCTGCAGCCGCTGGTCACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCA
GACGCGCGAGGAGGTGGTGGGCGGCGACGACTCGGACGGGTTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCC
CGGTGCCCGCGCCGGCCGGCGGCGACGACGACTACATTGAACAAACGCTGGTCACCGTGGCGGCGGCCGGCAAGAGCGGC
GGCGGCGGCTCGTCGTCGTCGGGAGGCGGCCGCGTCAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTCAG
CGGCGGGGCCGGCGCGGCGGGCGGCGGCGGCGCCGACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGA
CCCTGGAGGGCGAGTTCTCGGTCACCATGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTTGAAGAA
CAGATCATTGGAGAGAACTCACCTCCTGATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGG
CATTGACCTCTCAGATCCCAAACAACTGGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAA
GAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCAC
GGTCCCAGAGTCCACGTCTGTGCAGAATGTGGCAAAGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCA
TACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATG
TGCGAATCCATACCGGAGACAGGCCCTATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTG
AAATCTCACATCTTAACACATGCTAAGGCCAAAAACAACCAGTGA
ATGGCCTCGGGCGACACCCTCTACATCGCCACGGACGGCTCGGAGATGCCGGCCGAGATCGTGGAGCTGCACGAGATCGA
GGTGGAGACCATCCCGGTGGAGACCATCGAGACCACAGTGGTGGGCGAAGAGGAGGAGGAGGACGACGACGACGAGGACG
GCGGCGGTGGCGACCACGGCGGCGGGGGCGGCCACGGGCACGCCGGCCACCACCACCACCACCATCACCACCACCACCAC
CCGCCCATGATCGCTCTGCAGCCGCTGGTCACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCA
GACGCGCGAGGAGGTGGTGGGCGGCGACGACTCGGACGGGTTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCC
CGGTGCCCGCGCCGGCCGGCGGCGACGACGACTACATTGAACAAACGCTGGTCACCGTGGCGGCGGCCGGCAAGAGCGGC
GGCGGCGGCTCGTCGTCGTCGGGAGGCGGCCGCGTCAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTCAG
CGGCGGGGCCGGCGCGGCGGGCGGCGGCGGCGCCGACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGA
CCCTGGAGGGCGAGTTCTCGGTCACCATGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTTGAAGAA
CAGATCATTGGAGAGAACTCACCTCCTGATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGG
CATTGACCTCTCAGATCCCAAACAACTGGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAA
GAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCAC
GGTCCCAGAGTCCACGTCTGTGCAGAATGTGGCAAAGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCA
TACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATG
TGCGAATCCATACCGGAGACAGGCCCTATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTG
AAATCTCACATCTTAACACATGCTAAGGCCAAAAACAACCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .84 RPM |
| SRP007412_cerebellum | 18 .87 RPM |
| SRP007412_heart | 5 .97 RPM |
| SRP007412_kidney | 29 .32 RPM |
| SRP007412_liver | 25 .96 RPM |
| SRP007412_testis | 44 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011146 | possible_ortholog | 1 retrogene | |
| Bos taurus | ENSBTAG00000020819 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016853 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000020809 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000005805 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000100811 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000002931 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021264 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000999 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000026938 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006955 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000025949 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000006717 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_2 | 63.33 | 65.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_190 | 66.98 | 51.21 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000026332 retrocopies