Parental gene:

YY1, ENSPTRG00000006717

Aliases:None
Description:YY1 transcription factor [Source:UniProtKB/TrEMBL;Acc:K7DAI9]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:99914396..99952924(+)


>ENSPTRG00000006717
GTCACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCAGACGCGCGAGGAGGTGGTGGGCGGCGA
CGACTCGGACGGGCTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCCCGGTGCCCGCGCCGGCCGGCGGCGACG
ACGACTACATTGAACAAACGCTGGTCACCGTGGCGGCGGCCGGCAAGAGCGGCGGCGGCGGCTCGTCGTCGTCGGGAGGC
GGCCGCGTCAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTCAGCGGCGGGGCCGGCGCGGCGGGCGGCGG
CGGCGCCGACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGACCCTGGAGGGCGAGTTCTCGGTCACCA
TGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCT
GATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGGCATTGACCTCTCAGATCCCAAACAACT
GGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCT
GCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCACGGTCCCAGAGTCCACGTCTGTGCAGAA
TGTGGCAAAGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCAC
GTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACACGTGCGAATCCATACCGGAGACAGGCCCT
ATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACATGCTAAG
GCCAAAAACAACCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .55 RPM
SRP007412_cerebellum 16 .02 RPM
SRP007412_heart 10 .61 RPM
SRP007412_kidney 20 .11 RPM
SRP007412_liver 16 .27 RPM
SRP007412_testis 21 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011146 possible_ortholog 1 retrogene
retro_amel_2,
Callithrix jacchus ENSCJAG00000016853 ortholog_one2many 2 retrogenes
retro_cjac_1931, retro_cjac_4045,
Equus caballus ENSECAG00000005805 possible_ortholog 1 retrogene
retro_ecab_97,
Homo sapiens ENSG00000100811 ortholog_one2one 2 retrogenes
retro_hsap_106, retro_hsap_97,
Gorilla gorilla ENSGGOG00000026332 ortholog_one2one 2 retrogenes
retro_ggor_190, retro_ggor_2,
Mus musculus ENSMUSG00000021264 possible_ortholog 1 retrogene
retro_mmus_190,
Nomascus leucogenys ENSNLEG00000000999 ortholog_one2one 3 retrogenes
retro_nleu_1092, retro_nleu_116, retro_nleu_2225,
Otolemur garnettii ENSOGAG00000006955 ortholog_one2one 4 retrogenes
retro_ogar_1231, retro_ogar_1804, retro_ogar_1857, retro_ogar_289,
Pongo abelii ENSPPYG00000025949 ortholog_one2one 3 retrogenes
retro_pabe_145, retro_pabe_3616, retro_pabe_534,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_45 67.45 65.23
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2. retro_ptro_494 68.93 61.54
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3. retro_ptro_3093 62.96 83.08
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Download FASTA sequences of all ENSPTRG00000006717 retrocopies