Parental gene: | YY1, ENSPTRG00000006717 |
| Aliases: | None |
| Description: | YY1 transcription factor [Source:UniProtKB/TrEMBL;Acc:K7DAI9] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 14:99914396..99952924(+) |
>ENSPTRG00000006717
GTCACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCAGACGCGCGAGGAGGTGGTGGGCGGCGA
CGACTCGGACGGGCTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCCCGGTGCCCGCGCCGGCCGGCGGCGACG
ACGACTACATTGAACAAACGCTGGTCACCGTGGCGGCGGCCGGCAAGAGCGGCGGCGGCGGCTCGTCGTCGTCGGGAGGC
GGCCGCGTCAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTCAGCGGCGGGGCCGGCGCGGCGGGCGGCGG
CGGCGCCGACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGACCCTGGAGGGCGAGTTCTCGGTCACCA
TGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCT
GATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGGCATTGACCTCTCAGATCCCAAACAACT
GGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCT
GCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCACGGTCCCAGAGTCCACGTCTGTGCAGAA
TGTGGCAAAGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCAC
GTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACACGTGCGAATCCATACCGGAGACAGGCCCT
ATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACATGCTAAG
GCCAAAAACAACCAGTGA
GTCACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCAGACGCGCGAGGAGGTGGTGGGCGGCGA
CGACTCGGACGGGCTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCCCGGTGCCCGCGCCGGCCGGCGGCGACG
ACGACTACATTGAACAAACGCTGGTCACCGTGGCGGCGGCCGGCAAGAGCGGCGGCGGCGGCTCGTCGTCGTCGGGAGGC
GGCCGCGTCAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTCAGCGGCGGGGCCGGCGCGGCGGGCGGCGG
CGGCGCCGACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGACCCTGGAGGGCGAGTTCTCGGTCACCA
TGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCT
GATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGGCATTGACCTCTCAGATCCCAAACAACT
GGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCT
GCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCACGGTCCCAGAGTCCACGTCTGTGCAGAA
TGTGGCAAAGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCAC
GTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACACGTGCGAATCCATACCGGAGACAGGCCCT
ATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACATGCTAAG
GCCAAAAACAACCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .55 RPM |
| SRP007412_cerebellum | 16 .02 RPM |
| SRP007412_heart | 10 .61 RPM |
| SRP007412_kidney | 20 .11 RPM |
| SRP007412_liver | 16 .27 RPM |
| SRP007412_testis | 21 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011146 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016853 | ortholog_one2many | 2 retrogenes | |
| Equus caballus | ENSECAG00000005805 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000100811 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026332 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000021264 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000999 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006955 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000025949 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_45 | 67.45 | 65.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_494 | 68.93 | 61.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_3093 | 62.96 | 83.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000006717 retrocopies