Parental gene:

Yy1, ENSMUSG00000021264

Aliases:Yy1, AW488674, NF-E1
Description:YY1 transcription factor [Source:MGI Symbol;Acc:MGI:99150]
Organism:Mouse (Mus musculus)
Coordinates:12:108792972..108816632(+)


>ENSMUSG00000021264
ATGGCCTCGGGCGACACCCTCTACATCGCCACGGACGGCTCGGAGATGCCGGCCGAGATCGTGGAGCTGCATGAGATCGA
GGTGGAGACCATCCCGGTGGAGACCATCGAGACCACGGTGGTGGGCGAGGAGGAGGAGGAGGACGACGACGACGAGGACG
GCGGCGGCGGCGACCACGGCGGCGGCGGGGGCGGCCACGGGCACGCCGGCCACCACCATCACCACCACCACCACCACCAC
CACCACCCGCCCATGATCGCGCTGCAGCCGCTGGTGACGGACGACCCGACCCAAGTGCACCACCACCAGGAGGTGATCCT
GGTGCAGACGCGCGAGGAGGTGGTCGGCGGGGACGACTCGGACGGGCTGCGCGCCGAGGACGGCTTCGAGGACCAGATCC
TCATCCCGGTGCCCGCGCCGGCCGGCGGCGACGACGACTACATAGAGCAGACGCTGGTCACCGTGGCGGCGGCCGGCAAG
AGCGGCGGCGGGGCCTCGTCGGGCGGCGGTCGCGTGAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTGGG
CGGCGGGGCCGGCGCGGCGGGCGGCGGCGGCGCCGACCCGGGGAATAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGA
CCCTGGAGGGCGAGTTCTCGGTCACCATGTGGTCCTCGGATGAAAAAAAAGATATTGACCATGAAACAGTGGTTGAAGAG
CAGATCATTGGAGAGAACTCACCTCCTGATTATTCTGAATATATGACAGGCAAGAAACTCCCTCCTGGAGGGATACCTGG
CATTGACCTCTCAGACCCTAAGCAACTGGCAGAATTTGCCAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAA
GAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCTGCTATGAGAAAGCATCTGCACACCCAC
GGTCCCAGAGTCCACGTCTGTGCAGAGTGTGGCAAAGCGTTCGTTGAGAGCTCAAAGCTAAAACGACACCAGCTGGTTCA
TACTGGAGAAAAGCCCTTTCAGTGCACATTCGAAGGCTGCGGGAAGCGCTTTTCACTGGACTTCAATTTGCGCACACATG
TGCGAATCCATACCGGAGACAGGCCCTATGTGTGCCCCTTCGACGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTG
AAATCTCACATCTTAACACACGCTAAAGCCAAAAACAACCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 26 .98 RPM
SRP007412_cerebellum 24 .97 RPM
SRP007412_heart 21 .67 RPM
SRP007412_kidney 33 .13 RPM
SRP007412_liver 29 .55 RPM
SRP007412_testis 30 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011146 ortholog_one2one 1 retrogene
retro_amel_2,
Bos taurus ENSBTAG00000020819 ortholog_one2one 1 retrogene
retro_btau_91,
Callithrix jacchus ENSCJAG00000016853 possible_ortholog 2 retrogenes
retro_cjac_1931, retro_cjac_4045,
Cavia porcellus ENSCPOG00000020809 ortholog_one2one 2 retrogenes
retro_cpor_1220, retro_cpor_1522,
Equus caballus ENSECAG00000005805 possible_ortholog 1 retrogene
retro_ecab_97,
Homo sapiens ENSG00000100811 possible_ortholog 2 retrogenes
retro_hsap_106, retro_hsap_97,
Gorilla gorilla ENSGGOG00000026332 possible_ortholog 2 retrogenes
retro_ggor_190, retro_ggor_2,
Mustela putorius furo ENSMPUG00000002931 ortholog_one2one 1 retrogene
retro_mputfur_867,
Nomascus leucogenys ENSNLEG00000000999 possible_ortholog 3 retrogenes
retro_nleu_1092, retro_nleu_116, retro_nleu_2225,
Oryctolagus cuniculus ENSOCUG00000026938 ortholog_one2one 1 retrogene
retro_ocun_1871,
Otolemur garnettii ENSOGAG00000006955 possible_ortholog 4 retrogenes
retro_ogar_1231, retro_ogar_1804, retro_ogar_1857, retro_ogar_289,
Pongo abelii ENSPPYG00000025949 possible_ortholog 3 retrogenes
retro_pabe_145, retro_pabe_3616, retro_pabe_534,
Pan troglodytes ENSPTRG00000006717 possible_ortholog 3 retrogenes
retro_ptro_3093, retro_ptro_45, retro_ptro_494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_190 70.00 60.39
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Download FASTA sequences of all ENSMUSG00000021264 retrocopies