Parental gene:

SNRPF, ENSLACG00000002456

Aliases:None
Description:None
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH130736.1:49542..55767(+)


>ENSLACG00000002456
CGCCTTGCGGTGCTGCTTTCATTCATTCGCGGCCGGGCCAGGTCTGGTGGTTGCAGCCTTCCTAAAGGCCGCAATCGTTT
CGTTTATATAATATTTAGTTTACCTTTGAATCCGAAACCCTTTCTTAACGGGTTGACTGGGAAGCCAGTGATGGTCAAGT
TGAAATGGGGTATGGAATACAAAGGTTACTTGGTGTCTGTGGATGGATACATGAACATGCAACTTGCAAACACAGAAGAA
TACATCGACGGAGCATTGTCAGGCCATTTAGGAGAAGTCCTTATAAGGTGTAACAATGTGCTTTATATCAGAGGTGTTGA
AGAGGAAGAAGAAGATGGAGAAATGAGAGAATAG

Library Parental gene expression (RPM)
DRP000627_pectoral_fin 13 .91 RPM
DRP000627_kidney 5 .63 RPM
DRP000627_pelvic_fin 14 .61 RPM
DRP000627_pharynx 7 .35 RPM
DRP000627_gill 6 .10 RPM
DRP000627_tail_muscle 6 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002166 possible_ortholog 3 retrogenes
retro_amel_1239, retro_amel_42, retro_amel_883,
Canis familiaris ENSCAFG00000006395 possible_ortholog 6 retrogenes
retro_cfam_110, retro_cfam_1975, retro_cfam_372, retro_cfam_619, retro_cfam_742, retro_cfam_763,
Callithrix jacchus ENSCJAG00000002705 possible_ortholog 2 retrogenes
retro_cjac_1705, retro_cjac_3039,
Felis catus ENSFCAG00000029966 possible_ortholog 4 retrogenes
retro_fcat_280, retro_fcat_66, retro_fcat_77, retro_fcat_861,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_73 96.47 72.65
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSLACG00000002456 retrocopies