Parental gene:

MRPS25, ENSLACG00000009006

Aliases:None
Description:None
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH126975.1:387111..393784(+)


>ENSLACG00000009006
ATGCTTATGAAGGGCAAGTTTCCCATCAGGAGGACCCTGGAGTACCTACAGAAGGGAGAAGTTGTGTTTAAAAACGCAGT
GAAGATCATGACTGTCAATTATAACACGCATGGGGAACTGAGTGAAGGGGCAAGAAAGTTTGTTTTCTTCAATATACCCC
AGATCCAGTACAAAAACCCCTGGGTTCAAATAATGATGTTTAAGAATATGACCCCCTCACCATTTCTAAAGTTTTATTTA
GATGATGGTGAGCAAGTGTTGGTGGACGTGGAGGGCAAGAACCACACCGAAATATATCAGCACGTCAAGAAACTTTTAGG
CAAAAGCCAAGAGGTTCTGCACGCAGAGGAGCAGGCGAAGATGGTGCACTCCAACCCGGCCAACTTCGGACCCAAAAAGT
ACTGTCTGCGCGAATGCATGTGTGAGGTGGAGGGACAGGTCCCCTGCCCTGCCTTTGTGCCCTTGCCAAGGGAAATGACC
GGAAAATACCGCAACGCTCAGAAAGAGTCCACGGAAGTTTAG

Library Parental gene expression (RPM)
DRP000627_pectoral_fin 3 .93 RPM
DRP000627_kidney 4 .88 RPM
DRP000627_pelvic_fin 5 .47 RPM
DRP000627_pharynx 2 .98 RPM
DRP000627_gill 3 .21 RPM
DRP000627_tail_muscle 2 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004349 ortholog_one2one 1 retrogene
retro_amel_1861,
Canis familiaris ENSCAFG00000028683 ortholog_one2one 1 retrogene
retro_cfam_2200,
Callithrix jacchus ENSCJAG00000017160 ortholog_one2one 1 retrogene
retro_cjac_3303,
Echinops telfairi ENSETEG00000008261 ortholog_one2one 2 retrogenes
retro_etel_1144, retro_etel_1227,
Felis catus ENSFCAG00000027687 ortholog_one2one 1 retrogene
retro_fcat_2014,
Homo sapiens ENSG00000131368 ortholog_one2one 1 retrogene
retro_hsap_1127,
Gorilla gorilla ENSGGOG00000011005 ortholog_one2one 1 retrogene
retro_ggor_880,
Loxodonta africana ENSLAFG00000022178 ortholog_one2one 1 retrogene
retro_lafr_1068,
Macaca mulatta ENSMMUG00000005157 ortholog_one2one 2 retrogenes
retro_mmul_1946, retro_mmul_874,
Mustela putorius furo ENSMPUG00000017248 ortholog_one2one 1 retrogene
retro_mputfur_1608,
Nomascus leucogenys ENSNLEG00000005218 ortholog_one2one 1 retrogene
retro_nleu_184,
Oryctolagus cuniculus ENSOCUG00000006984 ortholog_one2one 1 retrogene
retro_ocun_1040,
Ochotona princeps ENSOPRG00000009370 ortholog_one2one 3 retrogenes
retro_opri_288, retro_opri_690, retro_opri_951,
Pongo abelii ENSPPYG00000013409 ortholog_one2one 1 retrogene
retro_pabe_932,
Pelodiscus sinensis ENSPSIG00000008882 ortholog_one2one 1 retrogene
retro_psin_36,
Pan troglodytes ENSPTRG00000014658 ortholog_one2one 1 retrogene
retro_ptro_678,
Rattus norvegicus ENSRNOG00000010912 ortholog_one2one 1 retrogene
retro_rnor_1184,
Ictidomys tridecemlineatus ENSSTOG00000027997 ortholog_one2one 1 retrogene
retro_itri_984,
Tursiops truncatus ENSTTRG00000009881 ortholog_one2one 1 retrogene
retro_ttru_140,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_49 56.48 61.85
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Download FASTA sequences of all ENSLACG00000009006 retrocopies