Parental gene:

eif1axb, ENSLACG00000015565

Aliases:None
Description:eukaryotic translation initiation factor 1A, X-linked, b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH127036.1:1291515..1294961(-)


>ENSLACG00000015565
CAGGTTTGGATAAACACTTCAGACATTATACTGATTGGGTTACGAGATTACCAGGACACCAAGGCTGATGTCATTCTAAA
ATACAATGCAGATGAAGCTAGAAGCTTGAAAGCGTATGGTGAACTTCCAGAACATGCCAAAATCAATGAAACAGACACAT
TTGGTCCTGGTGATGATGATGAAATCCAGTTTGATGACATTGGCGATGATGATGAGGATATTGATGATGTAAGTATAATG
GAAATC

Library Parental gene expression (RPM)
DRP000627_gill 70 .75 RPM
DRP000627_kidney 68 .04 RPM
DRP000627_pectoral_fin 60 .01 RPM
DRP000627_pelvic_fin 82 .04 RPM
DRP000627_pharynx 88 .32 RPM
DRP000627_tail_muscle 56 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016604 ortholog_one2one 1 retrogene
retro_amel_1421,
Callithrix jacchus ENSCJAG00000005371 ortholog_one2one 1 retrogene
retro_cjac_66,
Homo sapiens ENSG00000173674 possible_ortholog 2 retrogenes
retro_hsap_1431, retro_hsap_350,
Microcebus murinus ENSMICG00000004110 ortholog_one2one 2 retrogenes
retro_mmur_183, retro_mmur_197,
Myotis lucifugus ENSMLUG00000012977 ortholog_one2one 2 retrogenes
retro_mluc_250, retro_mluc_3,
Macaca mulatta ENSMMUG00000000193 ortholog_one2one 1 retrogene
retro_mmul_1590,
Monodelphis domestica ENSMODG00000027820 possible_ortholog 1 retrogene
retro_mdom_274,
Mus musculus ENSMUSG00000067194 possible_ortholog 1 retrogene
retro_mmus_264,
Nomascus leucogenys ENSNLEG00000009913 ortholog_one2one 1 retrogene
retro_nleu_1845,
Otolemur garnettii ENSOGAG00000008182 ortholog_one2many 1 retrogene
retro_ogar_128,
Pan troglodytes ENSPTRG00000022504 possible_ortholog 1 retrogene
retro_ptro_978,
Rattus norvegicus ENSRNOG00000005736 possible_ortholog 1 retrogene
retro_rnor_24,
Sus scrofa ENSSSCG00000029864 possible_ortholog 1 retrogene
retro_sscr_948,
Tupaia belangeri ENSTBEG00000017492 ortholog_one2one 6 retrogenes
retro_tbel_1604, retro_tbel_312, retro_tbel_3762, retro_tbel_4137, retro_tbel_4712, retro_tbel_798,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_65 67.61 85.37
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Download FASTA sequences of all ENSLACG00000015565 retrocopies