Parental gene:

PSMB8, ENSLAFG00000003213

Aliases:None
Description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:G3SRY0]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_105:3155528..3158348(+)


>ENSLAFG00000003213
ATGGCGCTCCAGGAGGTGTGCGGAGCCACCCGAGGGCAGTGCGAAGACTGGGCTCTTCCCGGCACGGGAAGCAGACACCG
CTCGGACCCGGGACACTACAGTTTCTCTCTGAGATCTCCGGAGCTCGCCCTTCCCCGGGGAATGCAGCCAACTGAATTCT
TCTGGTCCCTGAGTGGGGACAGAGAAAGAAACGTTTGCATTGAGATGAACCATGGCACCACCACACTAGCCTTCAAGTTC
CAGCATGGAGTGATTGTGGCAGTGGATTCCCGAGCCTCCGCTGGAACTTACATTGCCAACTTACAGACTAAAAAGGTGAT
TGAGATTAACCCTTACCTGCTTGGCACCATGTCTGGCTCTGCAGCTGACTGTCAGTACTGGGAGCGTCTGCTGGCCAAGG
AGTGCAGGCTGTACTACCTGCGGAATGGGGAGCGCATCTCAGTGTCAGCAGCCTCCAAACTGCTCTCCAACATGATGTGC
CAGTACCGGGGCATGGGCCTCTCCATGGGCAGCATGATCTGTGGCTGGGACAAGAAGGGTCCTGGACTCTACTATGTGGA
TGATAGTGGGACTCGGCTTTCAGGAAGTATGTTCTCCACTGGTAGTGGGAACCCTTATGCCTACGGGGTCATGGACAGTG
GCTACCAGCCTAATCTTAGCCCTGAAGAGGCCTATGACCTTGCCCGCAGGGCTATTGCTCATGCTACCCATCGAGACAGC
TATTCAGGAGGAGTTGTCAATATGTACCACATGAAGGAAGATGGTTGGGTAAAAGTGGAAAGTACAGATGTCAGTGACCT
GCTGCACCAGTATCGGGAGACCAATCAGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002026 ortholog_one2one 1 retrogene
retro_amel_27,
Bos taurus ENSBTAG00000003039 ortholog_one2one 1 retrogene
retro_btau_11,
Canis familiaris ENSCAFG00000000829 ortholog_one2one 1 retrogene
retro_cfam_75,
Equus caballus ENSECAG00000018887 ortholog_one2one 1 retrogene
retro_ecab_18,
Felis catus ENSFCAG00000023131 ortholog_one2one 1 retrogene
retro_fcat_30,
Microcebus murinus ENSMICG00000015254 ortholog_one2one 1 retrogene
retro_mmur_33,
Myotis lucifugus ENSMLUG00000013876 ortholog_one2one 1 retrogene
retro_mluc_285,
Monodelphis domestica ENSMODG00000014366 ortholog_one2one 1 retrogene
retro_mdom_179,
Otolemur garnettii ENSOGAG00000013830 ortholog_one2one 1 retrogene
retro_ogar_256,
Procavia capensis ENSPCAG00000016741 ortholog_one2one 1 retrogene
retro_pcap_21,
Pan troglodytes ENSPTRG00000018022 ortholog_one2one 2 retrogenes
retro_ptro_1102, retro_ptro_97,
Pteropus vampyrus ENSPVAG00000002800 ortholog_one2one 1 retrogene
retro_pvam_20,
Sus scrofa ENSSSCG00000026951 ortholog_one2many 1 retrogene
retro_sscr_90,
Tupaia belangeri ENSTBEG00000007794 ortholog_one2one 1 retrogene
retro_tbel_2055,
Tarsius syrichta ENSTSYG00000007730 ortholog_one2one 1 retrogene
retro_tsyr_1639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_65 51.20 75.72
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Download FASTA sequences of all ENSLAFG00000003213 retrocopies