Parental gene:

PSMB8, ENSMODG00000014366

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 8 [Source:HGNC Symbol;Acc:9545]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:270271775..270275521(-)


>ENSMODG00000014366
ATGGGGAAGGAGGGTTTTAGCTCGGGCTCCCGCCCCCTCTGTACCAGGCTTTCGCTTTCACTTCCCGTGGACCGGGAGGG
CCAGTCCGTGAACAGAGTGGGAAGAGGGAACATCATGGCGCTACTCCAAGTGTGCGGGGCTCCCTGGGGGCGGCAGGGGA
CTGGACATCGCCAAGATCCCGGGCACTACAGCTTCTCCCTTCGGACCCCGGAACTGGCCGTTCCTCGAGGGATGCAGCCT
CCTGAATTCCTTCGTTCTCTGGAGGCAGACCCAGCCCAGCAAGTCAGGATTGAGATGGCCCATGGTACCACCACGCTAGC
CTTCAAATTCCAGCATGGTGTGATTGTGGCAGTGGATTCCCGGGCCTCAGCAGGGAGTTATATTGCCACTCTGCATGTGA
ACAAAGTAATTGAGATTAATCCTTATCTTCTGGGCACCATGTCAGGCTGTGCAGCTGACTGTCAATACTGGGAGCGTCTC
TTAGCCAAAGAGTGTCGGTTGTACCGCCTTCGGAATGGGGAACGCATTTCTGTATCTGCTGCTTCCAAGCTGCTGTCCAA
TATGATGTGTCAATACCGAGGCATGGGGCTGTCCATGGGCAGTATGATCTGTGGTTGGGACAAAAAGGGCCCTGGATTGT
ATTATGTGGATGAAAATGGAACAAGACTGTCAGGGACTATGTTTTCTACAGGCAGTGGAAATAGTTATGCCTATGGTGTT
ATGGACAGTGGCTACCGACCTGACCTTAGCCCTGAGGAAGCTTATGACCTTGGCCGTCGGGCCATCGTCCATGCCACCCA
CCGGGACAGCTACTCTGGAGGGTTTGTCAATATGTACCACATGAAGGAAGATGGCTGGGTGAAGGTGGAGAGTTCAGATG
TCTCTAACCTTTTCCATAAGTACTTGGAGACTCGAGGGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002026 ortholog_one2one 1 retrogene
retro_amel_27,
Bos taurus ENSBTAG00000003039 ortholog_one2one 1 retrogene
retro_btau_11,
Canis familiaris ENSCAFG00000000829 ortholog_one2one 1 retrogene
retro_cfam_75,
Equus caballus ENSECAG00000018887 ortholog_one2one 1 retrogene
retro_ecab_18,
Felis catus ENSFCAG00000023131 ortholog_one2one 1 retrogene
retro_fcat_30,
Loxodonta africana ENSLAFG00000003213 ortholog_one2one 1 retrogene
retro_lafr_65,
Microcebus murinus ENSMICG00000015254 ortholog_one2one 1 retrogene
retro_mmur_33,
Myotis lucifugus ENSMLUG00000013876 ortholog_one2one 1 retrogene
retro_mluc_285,
Otolemur garnettii ENSOGAG00000013830 ortholog_one2one 1 retrogene
retro_ogar_256,
Procavia capensis ENSPCAG00000016741 ortholog_one2one 1 retrogene
retro_pcap_21,
Pan troglodytes ENSPTRG00000018022 ortholog_one2one 2 retrogenes
retro_ptro_1102, retro_ptro_97,
Pteropus vampyrus ENSPVAG00000002800 ortholog_one2one 1 retrogene
retro_pvam_20,
Sus scrofa ENSSSCG00000026951 ortholog_one2many 1 retrogene
retro_sscr_90,
Tupaia belangeri ENSTBEG00000007794 ortholog_one2one 1 retrogene
retro_tbel_2055,
Tarsius syrichta ENSTSYG00000007730 ortholog_one2one 1 retrogene
retro_tsyr_1639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_179 53.62 67.65
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Download FASTA sequences of all ENSMODG00000014366 retrocopies