Parental gene:

GPD1L, ENSLAFG00000013996

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_36:7342837..7398159(-)


>ENSLAFG00000013996
ATGGCAGCGGCGCCCCTGAAAGTGTGCATCGTGGGCTCGGGGAACTGGGGCTCAGCTGTGGCAAAGATTATTGGCAATAA
TGTCAAGAAGCTTCAGAAGTTTGCCTCCACGGTCAAGATGTGGGTCTTTGAAGAAACGGTTAATGGGAGAAAACTGACAG
ACATCATAAATAATGACCACGAAAATATAAAATACCTCCCTGGACACAAGCTGCCAGAAAATGTGGTTGCAGTCTCAAAT
CTCAAAGAGGCCGTGCAGGACGCAGACCTGCTGGTGTTTGTCATCCCTCACCAATTCATTCACAGAATCTGTGACGAGAT
CACCGGGAGGGTGTCCAAGGGAGCGCTGGGAATCACCCTCATCAAGGGGATAGACAAGGGCCCGGACGGGCTGAAACTCA
TTTCCGACATCATCCGGGAAAAGGTGAGCATTGACATCAGCGTGCTCATGGGGGCCAACATCGCCAACGAGGTGGCTGCA
GAGAAGTTCTGTGAGACCACCATCGGCAGCAAAGTTATGGAGAACGGCCTTCTGTTCAAGGAACTTCTTCAGACTCCAAA
CTTCCGGATTACAGTGGTTGATGACGCAGATACTGTTGAACTTTGTGGTGCTCTGAAGAACATCGTAGCCGTGGGAGCCG
GGTTCTGCGACGGCCTGCACTGCGGGGACAACACCAAAGCTGCTGTCATCCGCCTAGGACTCATGGAGATGATCTCATTT
GCCAGAATCTTCTGCAGGGGCCATGTGTCCACTGCCACCTTCCTGGAGAGCTGCGGGGTGGCCGACCTGATCACCACCTG
CTACGGGGGCCGGAACCGCAGAGTGGCCGAAGCGTTTGCCAGGACGGGCAAGACTATCGAAGAACTGGAGAAAGAGATGC
TGAATGGGCAGAAGCTCCAGGGGCCTCAGACTTCCGCGGAAGTGTACCGCATCCTTAAGCAGAAGGGACTGATCGACAAG
TTTCCGCTGTTTACTGCAGTGTATCAGATCTGCTACGAAGGAAAACCTGTTAAAGATATGTTGTCTTGCCTCCAGTGCCA
CCCAGAGCACACATAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009826 ortholog_one2many 1 retrogene
retro_btau_1671,
Choloepus hoffmanni ENSCHOG00000012633 ortholog_one2many 5 retrogenes
retro_chof_1033, retro_chof_306, retro_chof_340, retro_chof_620, retro_chof_724,
Microcebus murinus ENSMICG00000011060 ortholog_one2many 1 retrogene
retro_mmur_1205,
Mus musculus ENSMUSG00000050627 ortholog_one2many 3 retrogenes
retro_mmus_1348, retro_mmus_2552, retro_mmus_3695,
Oryctolagus cuniculus ENSOCUG00000010093 ortholog_one2many 2 retrogenes
retro_ocun_1529, retro_ocun_1588,
Otolemur garnettii ENSOGAG00000013243 ortholog_many2many 1 retrogene
retro_ogar_285,
Procavia capensis ENSPCAG00000016132 ortholog_one2one 1 retrogene
retro_pcap_316,
Rattus norvegicus ENSRNOG00000026455 ortholog_one2many 2 retrogenes
retro_rnor_2035, retro_rnor_2474,
Sus scrofa ENSSSCG00000021977 ortholog_one2many 1 retrogene
retro_sscr_154,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_101 90.03 100.00
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Download FASTA sequences of all ENSLAFG00000013996 retrocopies