Parental gene: | GPD1L, ENSOCUG00000010093 |
| Aliases: | None |
| Description: | glycerol-3-phosphate dehydrogenase 1-like [Source:HGNC Symbol;Acc:28956] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 14:19274858..19305707(+) |
>ENSOCUG00000010093
GGTTCCGCTGTTGCAAAAATCATTGGCAATAATGTCAAGAAACTTCAGAAGTTTGCCTCCACAGTCAAGATGTGGGTCTT
TGAAGAAACCGTTAATGGGAGGAAACTGACAGACATCATCAATAACGACCACGAAAATGTCAAGTATCTCCCCGGTCACA
AGCTGCCGGAAAACGTGGTAAGCCTCTGGGGCGCAACGACATCACTGGCAGGCGCTTTTGTCCTAGTTGAAAATACAGGG
AGGATTTTTAAAAACAGCTCATTCGATCATTTAAAAAATCAATTAATCAAGTGTAATACTATTGCTATTTTTAAAACAAG
AATCAGTCAGGAGGCAGAGCCAGGGTTGAACTCTGTTGAAAATACCCTGGGAAGGAGGAGGGGGGGAGATAGGGCCGTGG
TGGAGGGGTGTAATCTTAGCAGTCGGAAGCTGAGCGAGAGGAGGTTCAATCACCTGTCTACAGGCAGCAAAGTCATGGAG
AACGGCCTCCTCTTCAAAGAGCTCCTGCAGACCCCGAACTTCCGGATCACTGTGGTAGATGACGCGGACACGGTGGAGCT
CTGTGGAGCCCTGAAGAACATCGTGGCCGTGGGAGCCGGATTCTGCGATGGCCTCCGCTGTGGCGACAACACCAAAGCCG
CCGTCATCCGCCTGGGCCTCATGGAAATGATTGCCTTTGCCAAGATCTTCTGCAGGGGCCAGGTGTCCACCGCCACCTTC
CTGGAGAGCTGCGGGGTAGCCGACCTGATCACCACCTGCTACGGAGGGCGGAACCGCAGGGTGGCCGAGGCCTTCGCCAG
GACAGGCAAGACCATTGAGGAACTGGAGAAGGAGATGCTGAATGGGCAGAAGCTGCAGGGACCTCAGACTTCTGCGGAAG
TATACCGCATCCTCTCGCAGAAGGGACTCACCGACAGGTTCCCGTTGTTCACCGCCGTCTACCAGATCTGCTACGAGGGC
AGACCGGTCCAGGAGATGCTGTCCTGTCTCCAGAGCCACCCAGAGCACATCTAA
GGTTCCGCTGTTGCAAAAATCATTGGCAATAATGTCAAGAAACTTCAGAAGTTTGCCTCCACAGTCAAGATGTGGGTCTT
TGAAGAAACCGTTAATGGGAGGAAACTGACAGACATCATCAATAACGACCACGAAAATGTCAAGTATCTCCCCGGTCACA
AGCTGCCGGAAAACGTGGTAAGCCTCTGGGGCGCAACGACATCACTGGCAGGCGCTTTTGTCCTAGTTGAAAATACAGGG
AGGATTTTTAAAAACAGCTCATTCGATCATTTAAAAAATCAATTAATCAAGTGTAATACTATTGCTATTTTTAAAACAAG
AATCAGTCAGGAGGCAGAGCCAGGGTTGAACTCTGTTGAAAATACCCTGGGAAGGAGGAGGGGGGGAGATAGGGCCGTGG
TGGAGGGGTGTAATCTTAGCAGTCGGAAGCTGAGCGAGAGGAGGTTCAATCACCTGTCTACAGGCAGCAAAGTCATGGAG
AACGGCCTCCTCTTCAAAGAGCTCCTGCAGACCCCGAACTTCCGGATCACTGTGGTAGATGACGCGGACACGGTGGAGCT
CTGTGGAGCCCTGAAGAACATCGTGGCCGTGGGAGCCGGATTCTGCGATGGCCTCCGCTGTGGCGACAACACCAAAGCCG
CCGTCATCCGCCTGGGCCTCATGGAAATGATTGCCTTTGCCAAGATCTTCTGCAGGGGCCAGGTGTCCACCGCCACCTTC
CTGGAGAGCTGCGGGGTAGCCGACCTGATCACCACCTGCTACGGAGGGCGGAACCGCAGGGTGGCCGAGGCCTTCGCCAG
GACAGGCAAGACCATTGAGGAACTGGAGAAGGAGATGCTGAATGGGCAGAAGCTGCAGGGACCTCAGACTTCTGCGGAAG
TATACCGCATCCTCTCGCAGAAGGGACTCACCGACAGGTTCCCGTTGTTCACCGCCGTCTACCAGATCTGCTACGAGGGC
AGACCGGTCCAGGAGATGCTGTCCTGTCTCCAGAGCCACCCAGAGCACATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .25 RPM |
| SRP017611_kidney | 57 .98 RPM |
| SRP017611_brain | 94 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009826 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000012633 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000013996 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011060 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000050627 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013243 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016132 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000026455 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021977 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1529 | 60.10 | 59.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1588 | 61.08 | 59.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000010093 retrocopies