Parental gene:

GPD1L, ENSPCAG00000016132

Aliases:None
Description:glycerol-3-phosphate dehydrogenase 1-like [Source:HGNC Symbol;Acc:28956]
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_4504:1284..25213(+)


>ENSPCAG00000016132
GGCTCAGCTGTGGCAAAGATCATTGGCAATAATGTCAAGAAGCTTCACAAGTTTGCCTCCACGGTGAAGATGTGGGTCTT
TGAAGAAACGGTTAATGGAAGAAAGCTGACAGACATCATCAATAATGACCACGAGAATGTGAAATATCTCCCTGGACACA
AGCTGCCAGAAAATGTGATCGCCGTTTCCAATCTCAATGAGGCCGTGCAGGACGCAGACCTGCTGGTGTTTGTCATCCCC
CACCAGTTCATTCACAGGATCTGTGATGAGATCACCGGGAGGGTGTCCAAGAAAGCGCTGGGGATCACCCTCATCAAGGG
GATAGACGAGGGTCCTGATGGACTGAAGCTGATCTCTGACATCATCCGCGAGAAGATGAGCATCGACATCAGCGTGCTCA
TGGGGGCCAACATCGCCAACGAGGTGGCTGCTGAGAAGTTCTGCGAGACCACTATCGGCAGCAAGGTGATGGAGAACGGC
CTTCTCTTCAAAGAACTCCTGCAGACGCCCAATTTCCGGATTACGGTAGTTGATGACGCAGACACCGTTGAGCTTTGTGG
TGCACTCAAGAACATCGTGGCTGTGGGAGCTGGGTTCTGTGACGGCCTGCACTGTGGGGACAACACCAAGGCCGCGGTGA
TCCGCCTGGGGCTCATGGAGATGATCTCCTTCGCCAGGATCTTCTGCACAGGCCAGGTGTCCACGGCCACCTTCCTGGAG
AGCTGCGGGGTGGCTGACCTGATTACCACCTGCTACGGTGGCCGGAACCGCCGGGTGGCCGAGGCGTTTGCCAGGACGGG
CAAGACCATTGAGGAGCTGGAGAAGGAGATGCTGAACGGGCAGAAGCTGCAGGGACCCCAGACTTCGGCAGAGGTGTACC
GCATCCTGAAGCAGAAGGGACTGACTGACAAGTTTCCTCTGTTCACTGCAGTCTATCAGATCTGCTACGAAGGGAAACCC
GTGCAAGACATGTTGTCCTGTCTCCAGTGTCATCCCGAGCACAGATAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009826 ortholog_one2one 1 retrogene
retro_btau_1671,
Choloepus hoffmanni ENSCHOG00000012633 ortholog_one2one 5 retrogenes
retro_chof_1033, retro_chof_306, retro_chof_340, retro_chof_620, retro_chof_724,
Loxodonta africana ENSLAFG00000013996 ortholog_one2one 1 retrogene
retro_lafr_101,
Microcebus murinus ENSMICG00000011060 ortholog_one2one 1 retrogene
retro_mmur_1205,
Mus musculus ENSMUSG00000050627 ortholog_one2one 3 retrogenes
retro_mmus_1348, retro_mmus_2552, retro_mmus_3695,
Oryctolagus cuniculus ENSOCUG00000010093 ortholog_one2one 2 retrogenes
retro_ocun_1529, retro_ocun_1588,
Otolemur garnettii ENSOGAG00000013243 ortholog_one2many 1 retrogene
retro_ogar_285,
Rattus norvegicus ENSRNOG00000026455 ortholog_one2one 2 retrogenes
retro_rnor_2035, retro_rnor_2474,
Sus scrofa ENSSSCG00000021977 ortholog_one2one 1 retrogene
retro_sscr_154,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_316 88.21 58.21
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Download FASTA sequences of all ENSPCAG00000016132 retrocopies