Parental gene: | HNRNPH1, ENSLAFG00000015766 |
| Aliases: | None |
| Description: | None |
| Organism: | Elephant (Loxodonta africana) |
| Coordinates: | scaffold_1:106094208..106102115(-) |
>ENSLAFG00000015766
ATGATGTTGGGTACTGAAGGCGGAGAGGGATTCGTGGTGAAGGTTCGGGGCTTGCCCTGGTCTTGCTCGGCCGAAGAAGT
GCAGCGTTTTTTTTCTGACTGTAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACACGAGAAGGCAGACCAA
GTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGATGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACAC
AGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACAC
GGCCAATGATGGCTTTGTGCGGCTTAGAGGACTCCCCTTTGGCTGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGT
TGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCT
TCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAG
TCGAGCTGAAGTTAGAACTCATTATGATCCACCCAGAAAACTTATGGCTATGCAGCGGCCAGGTCCCTATGACAGACCTG
GGGCTGGCAGAGGGTATAACAGTATTGGCAGAGGAGCTGGCTTTGAAAGGATGAGGCGTGGTGCTTATGGTGGAGGTTAT
GGAGGCTACGATGACTATAACGGCTATAACGATGGCTATGGGTTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTG
TTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGTTCTACTTTCCAGAGCACGACAGGACATTGTGTGCACATGC
GGGGATTACCTTACAGAGCTACCGAAAACGACATTTACAATTTCTTTTCACCGCTTAACCCTGTGAGAGTACACATTGAA
ATTGGTCCTGACGGCAGAGTAACTGGAGAAGCAGATGTTGAGTTTGCTACTCATGAAGATGCTGTGGCAGCTATGTCAAA
AGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGAAC
ACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGGAGGCATG
GGTTTGTCAAACCAGTCCAGTTACGGTGGCCCAGCTAGCCAGCAGCTCAGTGGTGGTTATGGAGGCGGCTATGGTGGTCA
GAGCAGCATGAGTGGATATGGTAGCCAAGGAACAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGAG
TGAATGGAATGGGAGGGATGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATG
ATGATGTTGGGTACTGAAGGCGGAGAGGGATTCGTGGTGAAGGTTCGGGGCTTGCCCTGGTCTTGCTCGGCCGAAGAAGT
GCAGCGTTTTTTTTCTGACTGTAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACACGAGAAGGCAGACCAA
GTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGATGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACAC
AGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACAC
GGCCAATGATGGCTTTGTGCGGCTTAGAGGACTCCCCTTTGGCTGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGT
TGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCT
TCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAG
TCGAGCTGAAGTTAGAACTCATTATGATCCACCCAGAAAACTTATGGCTATGCAGCGGCCAGGTCCCTATGACAGACCTG
GGGCTGGCAGAGGGTATAACAGTATTGGCAGAGGAGCTGGCTTTGAAAGGATGAGGCGTGGTGCTTATGGTGGAGGTTAT
GGAGGCTACGATGACTATAACGGCTATAACGATGGCTATGGGTTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTG
TTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGTTCTACTTTCCAGAGCACGACAGGACATTGTGTGCACATGC
GGGGATTACCTTACAGAGCTACCGAAAACGACATTTACAATTTCTTTTCACCGCTTAACCCTGTGAGAGTACACATTGAA
ATTGGTCCTGACGGCAGAGTAACTGGAGAAGCAGATGTTGAGTTTGCTACTCATGAAGATGCTGTGGCAGCTATGTCAAA
AGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGAAC
ACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGGAGGCATG
GGTTTGTCAAACCAGTCCAGTTACGGTGGCCCAGCTAGCCAGCAGCTCAGTGGTGGTTATGGAGGCGGCTATGGTGGTCA
GAGCAGCATGAGTGGATATGGTAGCCAAGGAACAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGAG
TGAATGGAATGGGAGGGATGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000003841 | possible_ortholog | 4 retrogenes | |
| Equus caballus | ENSECAG00000014429 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000010991 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000013364 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000011303 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016625 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010843 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009436 | possible_ortholog | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000003513 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006715 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000007670 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000003024 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000018204 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lafr_74 | 74.27 | 86.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_lafr_366 | 94.05 | 78.62 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLAFG00000015766 retrocopies