Parental gene:

CHORDC1, ENSLAFG00000017340

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_35:147647..171199(-)


>ENSLAFG00000017340
ATGGCCCTGCTGTGCTACAACCGGGGCTGCGGCCAACGCTTCGATCCCGAGACCAATTCCGACGATGCTTGCACATACCA
CCCAGGCGTTCCAGTCTTTCATGATGCGTTAAAGGGTTGGTCTTGCTGTAAGAGAAGAACAACTGACTTTTCTGATTTCT
TAAGCATTGTAGGCTGTACAAAGGGTAGGCATAGTAGTGAAAAGCCACCCGAGCCTGTCAAACCTGAAGTGAAGACTACT
GAGAAGAAAGAACTATCTGAATTGAAACCTAAATTTCAGGAGCACATCATTCAAGCCCCTAAACCAGTAGAAGCAATAAA
AAGGCCAAGCCCAGATGAGCCAATGACAAATTTGGAGTTAAAAATATCTGCCTCCCTCAAACAAGCACTTGATAAACTTA
AACTGTCATCGGGGAATGAAGAAGATAAGAAGGAAGAAGAAAATGATGAAATTAAGATTGGGACCCCGTGTAAAAATGGA
GGCTGTTCGAAGACGTATCAGAGTCTACAAAGTCTAGAAGAAATCTGTGTGTATCATTCTGGAGTACCTGTTTTCCATGA
AGGGATGAAATACTGGAGCTGTTGTAGAAGAAAAACTTCTGATTTTAATACATTTTTAGCCCAAGAGGGCTGCACAACAG
GGAAACACCTGTGGACTAAAAAGGATGCCGGAGGAAAAGTTGTTCCATGTAGGCATGACTGGCATCAAACAGGAGGTGAA
GTCACCATTTCAATATATGCTAAAAATTCCCTTCCAGACCTTAGTCGAGTAGAAGCAAATAGTACATTGTTAAATGTGCT
CATTGTATTTGAAGGAGAGAAGGAATTTCATCAAAATGTGAAATTATGGGGTGTGATTGATGTAAAACGAAGCTATGTAA
CTATGACTGCAACAAAGATTGAGATCACCATGAGAAAAGCAGAACCTATGCAGTGGGCAAGCCTGGAACTGCCTGCAGCT
AAAAAGCCAGAAAAACAAAAAGAAGATACAACAGATTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000903 ortholog_one2one 4 retrogenes
retro_cjac_2220, retro_cjac_2927, retro_cjac_4147, retro_cjac_815,
Echinops telfairi ENSETEG00000013104 ortholog_one2one 2 retrogenes
retro_etel_1713, retro_etel_1860,
Felis catus ENSFCAG00000019389 ortholog_one2many 1 retrogene
retro_fcat_137,
Homo sapiens ENSG00000110172 ortholog_one2one 3 retrogenes
retro_hsap_1452, retro_hsap_1903, retro_hsap_2252,
Gorilla gorilla ENSGGOG00000027396 ortholog_one2many 3 retrogenes
retro_ggor_1117, retro_ggor_1118, retro_ggor_1679,
Macaca mulatta ENSMMUG00000005209 ortholog_one2many 2 retrogenes
retro_mmul_1024, retro_mmul_1923,
Nomascus leucogenys ENSNLEG00000007079 ortholog_one2one 5 retrogenes
retro_nleu_1085, retro_nleu_1232, retro_nleu_1320, retro_nleu_752, retro_nleu_981,
Oryctolagus cuniculus ENSOCUG00000014147 ortholog_one2one 1 retrogene
retro_ocun_1595,
Otolemur garnettii ENSOGAG00000003523 ortholog_one2one 1 retrogene
retro_ogar_2724,
Pongo abelii ENSPPYG00000003764 ortholog_one2one 5 retrogenes
retro_pabe_1199, retro_pabe_1554, retro_pabe_1734, retro_pabe_1959, retro_pabe_461,
Pan troglodytes ENSPTRG00000004164 ortholog_one2one 3 retrogenes
retro_ptro_1253, retro_ptro_1595, retro_ptro_988,
Tupaia belangeri ENSTBEG00000002910 ortholog_one2one 1 retrogene
retro_tbel_2891,
Tarsius syrichta ENSTSYG00000004205 ortholog_one2one 1 retrogene
retro_tsyr_1581,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_401 77.37 56.63
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Download FASTA sequences of all ENSLAFG00000017340 retrocopies