Parental gene: | CHORDC1, ENSNLEG00000007079 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397262.1:22850580..22871626(-) |
>ENSNLEG00000007079
ATGGCCTTGCTGTGCTACAACCGGGGCTGCGGTCAGCGCTTCGATCCTGAGACCAATTCTGACGATGCTTGCACATACCA
CCCAGGTGTTCCAGTCTTTCACGATGCATTAAAGGGTTGGTCTTGCTGTAAGAGAAGAACAACTGATTTTTCTGATTTCT
TAAGTATTGTAGGCTGCACAAAAGGTAGACATAATAGTGAGAAGCCACCTGAGCCAGTCAAACCTGAAGTCAAGACTACT
GAGAAGAAGGAACTTTCTGAATTAAAACCCAAATTTCAGGAACACATCATTCAAGCCCCTAAGCCAGTAGAAGCAATAAA
AAGACCAAGCCCAGATGAACCAATGACAAATTTGGAATTAAAAATATCTGCCTCTCTAAAACAAGCACTTGATAAACTTA
AACTGTCATCAGGGAATGAAGAAAATAAGAAAGAAGAAGACAATGATGAAATTAAGATTGGGACCTCATGTAAGAATGGA
GGGTGTTCAAAGACATATCGGGGTCTAGAGAGTCTAGAAGAAGTCTGTGTGTATCATTCTGGAGTACCTATTTTCCATGA
GGGGATGAAATACTGGAGCTGTTGTAGAAGAAAAACCTCTGATTTTAATACATTCTTAGCCCAAGAGGGCTGTACGAAAG
GGAAACACATGTGGACTAAAAAAGATGCTGGGAAAAAAGTTGTTCCATGTAGACATGACTGGCATCAGACTGGAGGTGAA
GTTACCATTTCAGTATATGCTAAAAACTCAGTTCCAGAACTTAGCCGAGTAGAAGCAAATAGCACATTGTTAAATGTGCA
TATTGTATTTGAAGGAGAGAAGGAATTTGATCAAAATGTGAAATTATGGGGTGTGATTGATGTAAAGCGAAGTTATGTAA
CTATGACTGCAACAAAGATTGAAATCACTATGAGAAAAGCTGAACCAATGCAGTGGGCAAGCCTTGAACTGCCTGCAGCT
AAAAAGCAGGAAAAACAAAAAGACAACACAACAGATTGA
ATGGCCTTGCTGTGCTACAACCGGGGCTGCGGTCAGCGCTTCGATCCTGAGACCAATTCTGACGATGCTTGCACATACCA
CCCAGGTGTTCCAGTCTTTCACGATGCATTAAAGGGTTGGTCTTGCTGTAAGAGAAGAACAACTGATTTTTCTGATTTCT
TAAGTATTGTAGGCTGCACAAAAGGTAGACATAATAGTGAGAAGCCACCTGAGCCAGTCAAACCTGAAGTCAAGACTACT
GAGAAGAAGGAACTTTCTGAATTAAAACCCAAATTTCAGGAACACATCATTCAAGCCCCTAAGCCAGTAGAAGCAATAAA
AAGACCAAGCCCAGATGAACCAATGACAAATTTGGAATTAAAAATATCTGCCTCTCTAAAACAAGCACTTGATAAACTTA
AACTGTCATCAGGGAATGAAGAAAATAAGAAAGAAGAAGACAATGATGAAATTAAGATTGGGACCTCATGTAAGAATGGA
GGGTGTTCAAAGACATATCGGGGTCTAGAGAGTCTAGAAGAAGTCTGTGTGTATCATTCTGGAGTACCTATTTTCCATGA
GGGGATGAAATACTGGAGCTGTTGTAGAAGAAAAACCTCTGATTTTAATACATTCTTAGCCCAAGAGGGCTGTACGAAAG
GGAAACACATGTGGACTAAAAAAGATGCTGGGAAAAAAGTTGTTCCATGTAGACATGACTGGCATCAGACTGGAGGTGAA
GTTACCATTTCAGTATATGCTAAAAACTCAGTTCCAGAACTTAGCCGAGTAGAAGCAAATAGCACATTGTTAAATGTGCA
TATTGTATTTGAAGGAGAGAAGGAATTTGATCAAAATGTGAAATTATGGGGTGTGATTGATGTAAAGCGAAGTTATGTAA
CTATGACTGCAACAAAGATTGAAATCACTATGAGAAAAGCTGAACCAATGCAGTGGGCAAGCCTTGAACTGCCTGCAGCT
AAAAAGCAGGAAAAACAAAAAGACAACACAACAGATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000000903 | ortholog_one2one | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000013104 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000019389 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000110172 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027396 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000017340 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005209 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014147 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003523 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003764 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000004164 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002910 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004205 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_752 | 64.86 | 54.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_981 | 87.13 | 60.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_1085 | 89.29 | 67.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_1232 | 93.06 | 52.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_1320 | 89.13 | 55.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000007079 retrocopies