Parental gene: | ZCCHC9, ENSMICG00000016266 |
| Aliases: | None |
| Description: | zinc finger, CCHC domain containing 9 [Source:HGNC Symbol;Acc:25424] |
| Organism: | Mouse Lemur (Microcebus murinus) |
| Coordinates: | GeneScaffold_1223:559268..566052(+) |
>ENSMICG00000016266
ATGACCAGGTGGGCACGCGTTACTACCACAGGTAACAAGAGACCCTTGCCTGCCACATCATGGGAGGACATGAAGAAGGA
GTCCTTTGAGGGAACAAGCCAAAACCTACCAAAGCGCAAACAAGTTGAAACCAATAGGCTATCCCTTAAAAATGATGCAC
CCCCAGCAAAACATAAAAAGAACAAAAAGAAAAAAGAATACTTCAATGAAGATGTGAATGGATTCATGGAATACCTAAGA
CAGAACTCACAGATGGTTCACAATGGGGATATTATAGCAACAGACAATCAGGAAGTAAGGGAAGAAATTGCAGTTGCTTT
AAAGAAAGACAGTCGACGGGAAGGAAGACGATTAAAAAGACAAGCAGCAAAGAAAAATGCAATGGTATGTTTCCATTGTA
GAAAACCTGGTCATGGAATTGCAGATTGCCCAGCCGCCCTTGAAAATCAAGATATGGGCACTGGAATATGTTACCGGTGT
GGGTCCACAGAGCATGAAATAACGAAGTGTAAGGCTAAAGTAGACCCAGCTGTTGGTGAATTTCCTTTTGCAAAATGTTT
TGTTTGTGGGGAAATGGGACACCTGTCTAGATCTTGTCCTGATAATCCTAAAGGAGTCTATGCTGATGGTGGTGGTTGCA
AACTTTGTGGCTCTGTGAAACATTTTAAGAAAGATTGCCCTGAAAGTCAGAATTCAGATCAAATGGTCACAGTTGGTCGT
TGGTCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATGCACCTAAACCACCGAAACCCAAAGCAAAGATACCTAA
AATTGTTAATTTTTGA
ATGACCAGGTGGGCACGCGTTACTACCACAGGTAACAAGAGACCCTTGCCTGCCACATCATGGGAGGACATGAAGAAGGA
GTCCTTTGAGGGAACAAGCCAAAACCTACCAAAGCGCAAACAAGTTGAAACCAATAGGCTATCCCTTAAAAATGATGCAC
CCCCAGCAAAACATAAAAAGAACAAAAAGAAAAAAGAATACTTCAATGAAGATGTGAATGGATTCATGGAATACCTAAGA
CAGAACTCACAGATGGTTCACAATGGGGATATTATAGCAACAGACAATCAGGAAGTAAGGGAAGAAATTGCAGTTGCTTT
AAAGAAAGACAGTCGACGGGAAGGAAGACGATTAAAAAGACAAGCAGCAAAGAAAAATGCAATGGTATGTTTCCATTGTA
GAAAACCTGGTCATGGAATTGCAGATTGCCCAGCCGCCCTTGAAAATCAAGATATGGGCACTGGAATATGTTACCGGTGT
GGGTCCACAGAGCATGAAATAACGAAGTGTAAGGCTAAAGTAGACCCAGCTGTTGGTGAATTTCCTTTTGCAAAATGTTT
TGTTTGTGGGGAAATGGGACACCTGTCTAGATCTTGTCCTGATAATCCTAAAGGAGTCTATGCTGATGGTGGTGGTTGCA
AACTTTGTGGCTCTGTGAAACATTTTAAGAAAGATTGCCCTGAAAGTCAGAATTCAGATCAAATGGTCACAGTTGGTCGT
TGGTCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATGCACCTAAACCACCGAAACCCAAAGCAAAGATACCTAA
AATTGTTAATTTTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005265 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000008703 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005268 | ortholog_one2one | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000003838 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001886 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020655 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021621 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002543 | ortholog_one2many | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014927 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000008580 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000014504 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001407 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000012423 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013796 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmur_125 | 84.76 | 60.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmur_606 | 70.48 | 76.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmur_819 | 68.98 | 79.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmur_1325 | 67.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmur_1341 | 78.70 | 61.99 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMICG00000016266 retrocopies