Parental gene:

ZCCHC9, ENSMICG00000016266

Aliases:None
Description:zinc finger, CCHC domain containing 9 [Source:HGNC Symbol;Acc:25424]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_1223:559268..566052(+)


>ENSMICG00000016266
ATGACCAGGTGGGCACGCGTTACTACCACAGGTAACAAGAGACCCTTGCCTGCCACATCATGGGAGGACATGAAGAAGGA
GTCCTTTGAGGGAACAAGCCAAAACCTACCAAAGCGCAAACAAGTTGAAACCAATAGGCTATCCCTTAAAAATGATGCAC
CCCCAGCAAAACATAAAAAGAACAAAAAGAAAAAAGAATACTTCAATGAAGATGTGAATGGATTCATGGAATACCTAAGA
CAGAACTCACAGATGGTTCACAATGGGGATATTATAGCAACAGACAATCAGGAAGTAAGGGAAGAAATTGCAGTTGCTTT
AAAGAAAGACAGTCGACGGGAAGGAAGACGATTAAAAAGACAAGCAGCAAAGAAAAATGCAATGGTATGTTTCCATTGTA
GAAAACCTGGTCATGGAATTGCAGATTGCCCAGCCGCCCTTGAAAATCAAGATATGGGCACTGGAATATGTTACCGGTGT
GGGTCCACAGAGCATGAAATAACGAAGTGTAAGGCTAAAGTAGACCCAGCTGTTGGTGAATTTCCTTTTGCAAAATGTTT
TGTTTGTGGGGAAATGGGACACCTGTCTAGATCTTGTCCTGATAATCCTAAAGGAGTCTATGCTGATGGTGGTGGTTGCA
AACTTTGTGGCTCTGTGAAACATTTTAAGAAAGATTGCCCTGAAAGTCAGAATTCAGATCAAATGGTCACAGTTGGTCGT
TGGTCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATGCACCTAAACCACCGAAACCCAAAGCAAAGATACCTAA
AATTGTTAATTTTTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005265 ortholog_one2many 1 retrogene
retro_btau_1095,
Canis familiaris ENSCAFG00000008703 ortholog_one2one 2 retrogenes
retro_cfam_1547, retro_cfam_675,
Choloepus hoffmanni ENSCHOG00000005268 ortholog_one2one 3 retrogenes
retro_chof_140, retro_chof_2143, retro_chof_268,
Echinops telfairi ENSETEG00000003838 ortholog_one2one 2 retrogenes
retro_etel_325, retro_etel_880,
Myotis lucifugus ENSMLUG00000001886 ortholog_one2one 1 retrogene
retro_mluc_799,
Macaca mulatta ENSMMUG00000020655 possible_ortholog 1 retrogene
retro_mmul_797,
Mus musculus ENSMUSG00000021621 ortholog_one2one 1 retrogene
retro_mmus_1920,
Otolemur garnettii ENSOGAG00000002543 ortholog_one2many 6 retrogenes
retro_ogar_1467, retro_ogar_2125, retro_ogar_2426, retro_ogar_2941, retro_ogar_3076, retro_ogar_459,
Rattus norvegicus ENSRNOG00000014927 ortholog_one2one 2 retrogenes
retro_rnor_1164, retro_rnor_2160,
Sorex araneus ENSSARG00000008580 ortholog_one2one 2 retrogenes
retro_sara_216, retro_sara_78,
Sarcophilus harrisii ENSSHAG00000014504 ortholog_one2one 1 retrogene
retro_shar_734,
Ictidomys tridecemlineatus ENSSTOG00000001407 ortholog_one2one 2 retrogenes
retro_itri_422, retro_itri_696,
Tarsius syrichta ENSTSYG00000012423 ortholog_one2one 1 retrogene
retro_tsyr_244,
Tursiops truncatus ENSTTRG00000013796 ortholog_one2one 1 retrogene
retro_ttru_819,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_125 84.76 60.15
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2. retro_mmur_606 70.48 76.01
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3. retro_mmur_819 68.98 79.34
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4. retro_mmur_1325 67.51 100.00
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5. retro_mmur_1341 78.70 61.99
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Download FASTA sequences of all ENSMICG00000016266 retrocopies