Parental gene:

ZCCHC9, ENSTSYG00000012423

Aliases:None
Description:zinc finger, CCHC domain containing 9 [Source:HGNC Symbol;Acc:25424]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_3373:31427..40558(+)


>ENSTSYG00000012423
ATGACCAGGTGGGCACGAGTCACTACCACACATAGCAAAAGACCCTTACCTGCAACATCATGGGAGGACATGAAGAAGGG
GTCCTGTGAGGGAACAAGCCAGTGTAAACAGCCTGAAGCCAGTCGACTCTCCCTTAAAAATGCGGCACCCCAAGCAAAAC
ATAAAAAGAACAAAAAGAAAAAAGAGTACTTAAATGAAGATGTGAATGGTTTCATGGAATACCTGAGACAGAACTCACAG
ATGGCTCACCATAGGGAGATTATAGCAACAGACAGTCAGGAAGTAAGGGAAGAAATTGCAGTGATTTTAAAGAAAGACAG
TCGACGGGAAGGAAGACGACTGAAAAGACAAGCAGCAAAGAAAAATGCAATGGTGTGTTTCCATTGTAGAAAACCTGGTC
ACGGAGTTGCAGATTGCCCAGCTGCCCTTGAAAATCAAGATATGGGCACTGGGATTTGTTATCGGTGTGGATCCACAGAG
CACGAGATAACCAAGTGTAAGGCCAAAGTAGACCCAGCTTTTGGTGAATTTCCTTTTGCAAAATGTTTTGTTTGTGGGGA
AATGGGGCACCTGTCAAGATCTTGTCCTGAAAATCCCAAAGGACTCTATGCTGATGGTGGTGGTTGCAGACTCTGTGGCT
CTGTGGAACACTTTAAGAAAGATTGCCCTGAAAGTCAGAGTTCAGATCGAACAGTCACAGTCGGTCGCTGGGCAAAGGGA
ATGAGTGCAGACTATGAAGAAATAGATACACCTAAACCGCAGAAACCCAGAACAAAGATACCTAAAATTGTTAATTTTTT
A

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005265 ortholog_one2many 1 retrogene
retro_btau_1095,
Canis familiaris ENSCAFG00000008703 ortholog_one2one 2 retrogenes
retro_cfam_1547, retro_cfam_675,
Choloepus hoffmanni ENSCHOG00000005268 ortholog_one2one 3 retrogenes
retro_chof_140, retro_chof_2143, retro_chof_268,
Echinops telfairi ENSETEG00000003838 ortholog_one2one 2 retrogenes
retro_etel_325, retro_etel_880,
Microcebus murinus ENSMICG00000016266 ortholog_one2one 5 retrogenes
retro_mmur_125, retro_mmur_1325, retro_mmur_1341, retro_mmur_606, retro_mmur_819,
Myotis lucifugus ENSMLUG00000001886 ortholog_one2one 1 retrogene
retro_mluc_799,
Macaca mulatta ENSMMUG00000020655 possible_ortholog 1 retrogene
retro_mmul_797,
Mus musculus ENSMUSG00000021621 ortholog_one2one 1 retrogene
retro_mmus_1920,
Otolemur garnettii ENSOGAG00000002543 ortholog_one2many 6 retrogenes
retro_ogar_1467, retro_ogar_2125, retro_ogar_2426, retro_ogar_2941, retro_ogar_3076, retro_ogar_459,
Rattus norvegicus ENSRNOG00000014927 ortholog_one2one 2 retrogenes
retro_rnor_1164, retro_rnor_2160,
Sorex araneus ENSSARG00000008580 ortholog_one2one 2 retrogenes
retro_sara_216, retro_sara_78,
Sarcophilus harrisii ENSSHAG00000014504 ortholog_one2one 1 retrogene
retro_shar_734,
Ictidomys tridecemlineatus ENSSTOG00000001407 ortholog_one2one 2 retrogenes
retro_itri_422, retro_itri_696,
Tursiops truncatus ENSTTRG00000013796 ortholog_one2one 1 retrogene
retro_ttru_819,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_244 87.21 64.04
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Download FASTA sequences of all ENSTSYG00000012423 retrocopies