Parental gene: | PSMC1, ENSMICG00000016733 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Source:HGNC Symbol;Acc:9547] |
| Organism: | Mouse Lemur (Microcebus murinus) |
| Coordinates: | GeneScaffold_186:1595032..1605593(+) |
>ENSMICG00000016733
GGTCAAAGTCAGAGTGGTGGCCATGGTCCTGGAGGCGGCAAGAAGGATGACAAGGACAAGAAAAAGAAATATGAACCTCC
TGTCCCAACTAGAGTGGGGAAAAAGAAGAAGAAAACAAAAGGACCAGATGCTGCCAGTAAACTGCCACTGGTGACACCTC
ACACTCAGTGCCGGTTAAAATTATTAAAGTTGGAGAGAATTAAAGACTATCTTCTCATGGAGGAAGAATTCATTAGAAAT
CAGGAACAAATGAAACCATTAGAAGAAAAGCAAGAGGAGGAAAGATCAAAAGTGGATGATCTGAGGGGGACCCCAATGTC
AGTAGGAACCTTGGAAGAGATCATCGATGACAATCATGCCATCGTGTCTACATCTGTGGGCTCAGAACACTATGTCAGCA
TTCTTTCATTTGTAGATAAGGACCTGCTGGAACCAGGCTGCTCGGTCCTGCTCAACCACAAGGTGCATGCTGTGATAGGG
GTGCTGATGGATGACACAGATCCCCTGGTCACAGTGATGAAGGTAGAAAAGGCCCCCCAGGAGACCTATGCTGATATTGG
GGGATTGGACAACCAAATCCAGGAAATTAAGGAATCTGTGGAGCTTCCTCTCACCCATCCTGAATATTATGAAGAGATGG
GTATAAAGCCCCCTAAGGGAGTCATTCTCTATGGTCCACCTGGCACAGGTAAAACCTTGTTAGCCAAAGCAGTAGCAAAC
CAGACTTCGGCCACTTTCTTGAGAGTGGTTGGCTCTGAACTCATTCAGAAGTACCTAGGTGATGGGCCCAAACTCGTACG
GGAATTGTTTCGAGTGGCTGAAGAACATGCACCTTCCATTGTATTTATTGATGAAATTGATGCCATTGGGACAAAAAGAT
ACGACTCAAATTCTGGTGGTGAGAGAGAAATTCAGCGAACAATGTTGGAACTGTTGAACCAGTTGGATGGATTTGATTCG
AGAGGAGATGTGAAAGTTATTATGGCCACAAACCGAATAGAAACTTTGGATCCAGCACTTATCAGACCAGGCCGCATTGA
CAGAAAGATCGAATTCCCCCTGCCCGATGAAAAGACTAAGAAGCGCATCTTTCAGATTCACACAAGCAGGATGACGCTGG
CTGATGATGTAACTCTGGATGACTTGATCATGGCTAAAGATGATCTTTCTGGTGCTGACATTAAGGCAATCTGTACAGAA
GCTGGTCTGATGGCTTTAAGAGAACGTAGAATGAAAGTAACAAATGAAGACTTCAAAAAGTCTAAAGAAAATGTTCTGTA
TAAAAAACAAGAAGGCACCCCCGAGGGGCTCTATCTCTAG
GGTCAAAGTCAGAGTGGTGGCCATGGTCCTGGAGGCGGCAAGAAGGATGACAAGGACAAGAAAAAGAAATATGAACCTCC
TGTCCCAACTAGAGTGGGGAAAAAGAAGAAGAAAACAAAAGGACCAGATGCTGCCAGTAAACTGCCACTGGTGACACCTC
ACACTCAGTGCCGGTTAAAATTATTAAAGTTGGAGAGAATTAAAGACTATCTTCTCATGGAGGAAGAATTCATTAGAAAT
CAGGAACAAATGAAACCATTAGAAGAAAAGCAAGAGGAGGAAAGATCAAAAGTGGATGATCTGAGGGGGACCCCAATGTC
AGTAGGAACCTTGGAAGAGATCATCGATGACAATCATGCCATCGTGTCTACATCTGTGGGCTCAGAACACTATGTCAGCA
TTCTTTCATTTGTAGATAAGGACCTGCTGGAACCAGGCTGCTCGGTCCTGCTCAACCACAAGGTGCATGCTGTGATAGGG
GTGCTGATGGATGACACAGATCCCCTGGTCACAGTGATGAAGGTAGAAAAGGCCCCCCAGGAGACCTATGCTGATATTGG
GGGATTGGACAACCAAATCCAGGAAATTAAGGAATCTGTGGAGCTTCCTCTCACCCATCCTGAATATTATGAAGAGATGG
GTATAAAGCCCCCTAAGGGAGTCATTCTCTATGGTCCACCTGGCACAGGTAAAACCTTGTTAGCCAAAGCAGTAGCAAAC
CAGACTTCGGCCACTTTCTTGAGAGTGGTTGGCTCTGAACTCATTCAGAAGTACCTAGGTGATGGGCCCAAACTCGTACG
GGAATTGTTTCGAGTGGCTGAAGAACATGCACCTTCCATTGTATTTATTGATGAAATTGATGCCATTGGGACAAAAAGAT
ACGACTCAAATTCTGGTGGTGAGAGAGAAATTCAGCGAACAATGTTGGAACTGTTGAACCAGTTGGATGGATTTGATTCG
AGAGGAGATGTGAAAGTTATTATGGCCACAAACCGAATAGAAACTTTGGATCCAGCACTTATCAGACCAGGCCGCATTGA
CAGAAAGATCGAATTCCCCCTGCCCGATGAAAAGACTAAGAAGCGCATCTTTCAGATTCACACAAGCAGGATGACGCTGG
CTGATGATGTAACTCTGGATGACTTGATCATGGCTAAAGATGATCTTTCTGGTGCTGACATTAAGGCAATCTGTACAGAA
GCTGGTCTGATGGCTTTAAGAGAACGTAGAATGAAAGTAACAAATGAAGACTTCAAAAAGTCTAAAGAAAATGTTCTGTA
TAAAAAACAAGAAGGCACCCCCGAGGGGCTCTATCTCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017510 | possible_ortholog | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000013595 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017701 | ortholog_one2one | 7 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006458 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000100764 | ortholog_one2one | 10 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010620 | ortholog_one2one | 8 retrogenes | |
| Macropus eugenii | ENSMEUG00000001526 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022990 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017013 | ortholog_one2one | 10 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006231 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000032343 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000025948 | ortholog_one2many | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000006623 | ortholog_one2one | 9 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmur_216 | 97.55 | 74.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmur_839 | 97.65 | 87.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmur_983 | 98.71 | 70.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmur_1039 | 88.89 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmur_1063 | 90.19 | 60.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmur_1245 | 96.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmur_1577 | 97.54 | 92.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMICG00000016733 retrocopies