Parental gene:

MMU.2633, ENSMMUG00000005645

Aliases:None
Description:nuclear ubiquitous casein and cyclin-dependent kinases substrate [Source:RefSeq peptide;Acc:NP_001253410]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:164685444..164698103(+)


>ENSMMUG00000005645
GTCTCTTCTTTCTACAGAAATAGGAAGGTTGTTGATTACTCACAGTTTCAGGAATCCGATGATGCAGATGAAGATTATGG
AAGAGATTCGGGCCCTCCCACTAAGAAAATTCGATCATCTCCCCGAGAAGCTAAAAATAAGAGGCGATCTGGAAAGAATT
CACAGGAAGATAGTGAGGACTCAGAAGACAAAGATGTGAAGACCAAGAAGGATGATTCTCACTCAGCAGAGGATAGTGAA
GATGAAAAAGAAGATCATAAAAACGTGCGCCAGCAACGGCAGGCGGCGTCTAAAGCAGCTTCTAAACAGAGGGAGATGCT
CATGGAAGATGTGGGCAGTGAGGAAGAACAAGAAGAGGAGGATGAGGCACCGTTCCAAGAGAAAGATTCCGGCAGCGATG
AAGATTTCCTAATGGAAGATGATGATGATAGTGACTATGGCAGTTCAAAAAAGAAAAACAAAAAGATGGTTAAGAAGTCC
AAACCTGAAAGAAAAGAAAAGAAAATGCCGAAACCCAGGCTAAAGGCTACAGTGACGCCAAGTCCAGTGAAAGGCAAAGG
GAAAGTGGGTCGCCCCACAGCTTCAAAGGCATCAAAGGAAAAGACTCCTTCTCCCAAAGAAGAAGATGAGGAACCAGAAA
GCCCGCCAGAAAAGAAAACATCTACAAGCCCCCCACCCGAGAAATCTGGGGATGAAGGGTCTGAAGATGAAGCCCCGTCT
GGGGAGGATTAG

Library Parental gene expression (RPM)
SRP007412_brain 94 .68 RPM
SRP007412_brain_prefrontal_cortex 64 .81 RPM
SRP007412_cerebellum 96 .99 RPM
SRP007412_heart 64 .07 RPM
SRP007412_kidney 61 .74 RPM
SRP007412_liver 25 .41 RPM
SRP007412_testis 40 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012950 ortholog_one2one 1 retrogene
retro_amel_339,
Bos taurus ENSBTAG00000008001 ortholog_one2one 1 retrogene
retro_btau_541,
Choloepus hoffmanni ENSCHOG00000001855 ortholog_one2one 1 retrogene
retro_chof_437,
Dasypus novemcinctus ENSDNOG00000017212 ortholog_one2many 2 retrogenes
retro_dnov_348, retro_dnov_6,
Dipodomys ordii ENSDORG00000003183 ortholog_one2one 1 retrogene
retro_dord_688,
Homo sapiens ENSG00000069275 ortholog_one2one 1 retrogene
retro_hsap_521,
Gorilla gorilla ENSGGOG00000026655 ortholog_one2one 1 retrogene
retro_ggor_480,
Macropus eugenii ENSMEUG00000007829 ortholog_one2one 2 retrogenes
retro_meug_2015, retro_meug_372,
Monodelphis domestica ENSMODG00000001832 ortholog_one2many 1 retrogene
retro_mdom_980,
Nomascus leucogenys ENSNLEG00000014564 ortholog_one2one 1 retrogene
retro_nleu_2576,
Pan troglodytes ENSPTRG00000001904 ortholog_one2one 1 retrogene
retro_ptro_389,
Rattus norvegicus ENSRNOG00000047287 ortholog_one2one 2 retrogenes
retro_rnor_2337, retro_rnor_2338,
Tupaia belangeri ENSTBEG00000015641 ortholog_one2one 1 retrogene
retro_tbel_2591,
Tarsius syrichta ENSTSYG00000000910 ortholog_one2one 1 retrogene
retro_tsyr_987,
Vicugna pacos ENSVPAG00000003751 ortholog_one2one 1 retrogene
retro_vpac_313,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_422 72.97 59.26
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Download FASTA sequences of all ENSMMUG00000005645 retrocopies