Parental gene:

LAPTM4B, ENSMMUG00000008926

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:8:100315406..100390252(+)


>ENSMMUG00000008926
ATGCAGTTACACGAATGGCCAGATGAAAAAGGGAAGGCCGGGACCTCCACTGATGGCCGACTAGGAGACCGCCCGAGGGT
GCACGCTGATGGATTTATTCACCCGGGGCTCGCTGCTCCCAGCTGGCTGGAGCCCGCGATGACGTCACGGCGGGTCACAT
GGCCGAGTCCGCCCCGCCCCCTCCCCGCCGCCACCGCCTTCGGAGCTCAGGGTCCGGACGCAGCAGACGCTAGGAGATCT
CGGGGGATCGAGGAGGCCCGGCGGGCGCACGGGCGAGAGGGCAGGGAGCCGGAGCGGCGGAGGAGCCGTCAGCAGCGGCG
CGGCGGGCCCCAGGCGAGGCGGTCGACGCTCAAAACTTGGGCGCGCGCTCGCGCCACTGCGCCCGGAGCGATGAAGATGG
TCGCGCCTTGGACGCGGTTCTACTCCAACAGCTGCTGCTTGTGCTGCCATGTCCGCACCGGCACCATCCTGCTCGGCGTC
TGGTATCTGATCATCAATGCTGTGGTACTGTTGATTTTATTGAGTGCCCTGGCCGATCCGGATCAGTATCACTTTTCAAG
TTCTGAACTGGGAGGTGACTTTGAGTTCATGGATGATGCCAACATGTGCATTGCCATTGCGATTTCTCTTCTCATGATTC
TGATATGTGCTATGGCTACTTACGGAGCGTACAAGCAACGCGCAGCCTGGATCATCCCATTCTTCTGTTACCAGATCTTT
GATTTTGCCCTGAACACCTTGGTTGCAATCACTGTGCTTGTTTATCCAAACTCCATTCAGGAATACATACGGCAACTGCC
TCCTAATTTTCCCTACAGAGATGATGTCATGTCAGTGAATCCTACCTGTTTGGTCCTTATTATTCTTCTATTTATTAGCA
TTATCTTGACTTTTAAGGGTTACTTGATTAGCTGTGTTTGGAACTGCTACCGATACATCAATGGCAGGAACTCCTCTGAT
GTCCTCGTTTATGTTACCAGCAATGACACTACGGTGCTGCTACCCCCGTATGATGATGCCACTGTGAATGGTGCTGCCAA
GGAGCCGCCGCCACCTTACGTGTCTGCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 37 .87 RPM
SRP007412_brain_prefrontal_cortex 38 .55 RPM
SRP007412_cerebellum 32 .87 RPM
SRP007412_heart 273 .76 RPM
SRP007412_kidney 62 .32 RPM
SRP007412_liver 33 .77 RPM
SRP007412_testis 84 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016959 possible_ortholog 3 retrogenes
retro_btau_1493, retro_btau_1759, retro_btau_786,
Callithrix jacchus ENSCJAG00000031235 ortholog_one2many 3 retrogenes
retro_cjac_1368, retro_cjac_1664, retro_cjac_3027,
Nomascus leucogenys ENSNLEG00000003756 ortholog_one2one 1 retrogene
retro_nleu_1531,
Otolemur garnettii ENSOGAG00000000512 ortholog_one2one 3 retrogenes
retro_ogar_1977, retro_ogar_2856, retro_ogar_2902,
Pongo abelii ENSPPYG00000018771 ortholog_one2one 2 retrogenes
retro_pabe_2311, retro_pabe_279,
Pan troglodytes ENSPTRG00000020448 ortholog_one2one 1 retrogene
retro_ptro_546,
Tursiops truncatus ENSTTRG00000003124 ortholog_one2one 1 retrogene
retro_ttru_76,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_532 81.39 75.84
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Download FASTA sequences of all ENSMMUG00000008926 retrocopies