Parental gene:

LAPTM4B, ENSOGAG00000000512

Aliases:None
Description:lysosomal protein transmembrane 4 beta [Source:HGNC Symbol;Acc:13646]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873523.1:28601117..28613489(-)


>ENSOGAG00000000512
TGGTTTCAGATCATCAATGCTGTGGTACTGCTGATTTTATTGAGCGCCCTGGCTGACCCAGATCAGCAACACTTTTCAAG
TTCTGAACTGGGAGGTGACTTTGAGTTCATGGATGATGCCAACATGTGCATCGCTATTGCAATTTCTTTTCTCATGATCC
TGATATGTGCAATGGCTACTTATGGAGCATATAAGCAACGTGCTGCCTGGATTGTCCCGTTCTTCTGTTACCAGATCTTC
GACTTTGCCCTGAATGCCTTGGTTGCAGTCACTGTGCTTGTCTATCCAAACTCCATTCAGGAGTACATACGGCAGCTGCC
TCCTAATTTTCCCTACAAAGATGATATCATGTCCGTGAATCCTACCTGTTTGGTCCTTATTATTCTTCTGTTCATTAGCA
TTATCTTGACTTTTAAGTGGAAGGCCATAAGTTGTCATTGTTGTTTTAGCTGGCCGGGGCTAGGTTCAAACCTGCCAACT
TCACTGTATGTGGCTGGCACCATAACCACTGTGCTATGGTCCCCA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016959 possible_ortholog 3 retrogenes
retro_btau_1493, retro_btau_1759, retro_btau_786,
Callithrix jacchus ENSCJAG00000031235 ortholog_one2many 3 retrogenes
retro_cjac_1368, retro_cjac_1664, retro_cjac_3027,
Myotis lucifugus ENSMLUG00000003618 possible_ortholog 1 retrogene
retro_mluc_1182,
Macaca mulatta ENSMMUG00000008926 ortholog_one2one 1 retrogene
retro_mmul_532,
Mus musculus ENSMUSG00000022257 possible_ortholog 1 retrogene
retro_mmus_1549,
Nomascus leucogenys ENSNLEG00000003756 ortholog_one2one 1 retrogene
retro_nleu_1531,
Oryctolagus cuniculus ENSOCUG00000013689 possible_ortholog 1 retrogene
retro_ocun_627,
Pongo abelii ENSPPYG00000018771 ortholog_one2one 2 retrogenes
retro_pabe_2311, retro_pabe_279,
Pan troglodytes ENSPTRG00000020448 ortholog_one2one 1 retrogene
retro_ptro_546,
Tursiops truncatus ENSTTRG00000003124 ortholog_one2one 1 retrogene
retro_ttru_76,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1977 80.00 82.29
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2. retro_ogar_2856 92.41 82.86
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3. retro_ogar_2902 51.72 97.71
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Download FASTA sequences of all ENSOGAG00000000512 retrocopies