Parental gene: | SNRPF, ENSMMUG00000009302 |
| Aliases: | None |
| Description: | small nuclear ribonucleoprotein polypeptide F [Source:HGNC Symbol;Acc:11162] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 11:97078463..97085641(+) |
>ENSMMUG00000009302
ATGAGTTTACCCCTCAATCCCAAACCTTTCCTCAATGGACTAACAGGAAAGCCAGTGATGGTGAAACTTAAGTGGGGAAT
GGAGTACAAGGGCTATCTGGTATCTGTAGATGGCTACATGAACATGCAGCTTGCAAATACAGAAGAATACATAGATGGAG
CTTTGTCTGGACATCTGGGTGAAGTTTTAATAAGGTGTAATAATGTCCTTTATATCAGAGGTGTGGAAGAAGAGGAAGAA
GATGGGGAAATGAGAGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 2 .80 RPM |
| SRP007412_brain_prefrontal_cortex | 5 .32 RPM |
| SRP007412_cerebellum | 3 .94 RPM |
| SRP007412_heart | 3 .42 RPM |
| SRP007412_kidney | 5 .16 RPM |
| SRP007412_liver | 2 .81 RPM |
| SRP007412_testis | 5 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002166 | possible_ortholog | 3 retrogenes | |
| Bos taurus | ENSBTAG00000016271 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000019817 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000029966 | possible_ortholog | 4 retrogenes | |
| Homo sapiens | ENSG00000139343 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001127 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000005524 | within_species_paralog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007176 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000020018 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005835 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000004847 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000009036 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000005556 | ortholog_one2one | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000000895 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_361 | 73.33 | 100.00 | Please wait, loading  |
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| 2. | retro_mmul_550 | 80.00 | 91.86 | Please wait, loading |
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| 3. | retro_mmul_893 | 98.84 | 100.00 | Please wait, loading |
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| 4. | retro_mmul_1521 | 67.05 | 98.84 | Please wait, loading |
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Download FASTA sequences of all ENSMMUG00000009302 retrocopies